| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2406 |
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| Symbol | |
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| ID | 7970450 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 2567636 |
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| End bp | 2568268 |
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| Gene Length | 633 bp |
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| Protein Length | 210 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644792989 |
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| Product | phosphoadenosine phosphosulfate reductase |
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| Protein accession | YP_002944299 |
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| Protein GI | 239815389 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0175] 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes |
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| TIGRFAM ID | [TIGR00434] phosophoadenylyl-sulfate reductase (thioredoxin) |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.137644 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGCATCG CCACGAACAT CGATCTTGCA CGCATCAACG CCGAACTCGG CCGCAACGCC
GAGGGCCTGG TGGACTGGGC CATCGGCCTC GGCCAGCGCG CGATCGTCAC CACCAATTTC
CGCCCGTTCG AGGCGGTGAT CCTGCACATG GTCACGCGCG CCAAGCGCGA TGTTCCTGTG
GTCTGGATGG ACAACGGCTA CAACACCGAG GCCACCTACC GCTTTGCCGA CGAGGTGACC
AGGCAGCTGG GCCTGGACCT GTACATCTAC CTGCCGCGCC GTTCGCGTGC GCATCGCGAA
GCCGTGGAAG GCCCGACGCC GGCGCTCGAC GATCCGCGCC ATGCCGCCTT TACCGAGGAA
GTGAAGCTCG AGCCCTTTGC CCGCGCGCTG CGCGAGACGG CACCGCAGGT CTGGTTCACC
GCGCTTCGGG CCACCGACAC GGCCGTGCGC GCGCAGATGG ACCCGGTCAG CGTCAATCCG
GACGGCTTGA TCAAGGTCGC GCCGCTCCTG CACTGGTCGT CCAAGGACCT GTACACGTAC
TGCGAAGCGC ATGGCCTGCC CAACAACTTC GACTACGTGG ACCCGACCAA GGGCGAAGAC
AACCGCGAGT GCGGATTGCA CCTCTCGCAC TGA
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| Protein sequence | MSIATNIDLA RINAELGRNA EGLVDWAIGL GQRAIVTTNF RPFEAVILHM VTRAKRDVPV
VWMDNGYNTE ATYRFADEVT RQLGLDLYIY LPRRSRAHRE AVEGPTPALD DPRHAAFTEE
VKLEPFARAL RETAPQVWFT ALRATDTAVR AQMDPVSVNP DGLIKVAPLL HWSSKDLYTY
CEAHGLPNNF DYVDPTKGED NRECGLHLSH
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