Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_2403 |
Symbol | |
ID | 7970447 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 2564929 |
End bp | 2565258 |
Gene Length | 330 bp |
Protein Length | 109 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 644792986 |
Product | 4Fe-4S ferredoxin iron-sulfur binding domain protein |
Protein accession | YP_002944296 |
Protein GI | 239815386 |
COG category | [C] Energy production and conversion |
COG ID | [COG1146] Ferredoxin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.461418 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCCACG TCGTCTCCGA AGCCTGCATC CGTTGCAAAT ACACCGACTG CGTGGACGTA TGCCCCGTGG ATTGCTTCCG CGAAGGCCCC AACATGCTGG TGATCGACCC GGACGAATGC ATCGACTGCG CCGTCTGCAT CCCCGAGTGC CCGGTCAACG CGATCTATGC CGAGGAAGAC CTTCCGGCCA ACCAGATCGC GTTCATCAAG CTCAACGCCG AACTCGCGGT GGCCGATGGC TGGAAGAGCA TCACCAAGCG CAAGCCCGCG CTGCCCGACG CCGAAGAATG GAAAGACAAG ACCGACAAGG TCGGCGAACT GGTCCGTTGA
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Protein sequence | MTHVVSEACI RCKYTDCVDV CPVDCFREGP NMLVIDPDEC IDCAVCIPEC PVNAIYAEED LPANQIAFIK LNAELAVADG WKSITKRKPA LPDAEEWKDK TDKVGELVR
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