| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2401 |
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| Symbol | |
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| ID | 7970445 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 2562607 |
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| End bp | 2563911 |
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| Gene Length | 1305 bp |
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| Protein Length | 434 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644792984 |
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| Product | aminotransferase class-III |
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| Protein accession | YP_002944294 |
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| Protein GI | 239815384 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0001] Glutamate-1-semialdehyde aminotransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.373076 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGATT CCGCAATCGA CCAGTCCCTT GCCCAGGCCT TCCAGCGCTT CACCGAGGCC
AACCCGGCCA GCCGGCGCCA GTTCGAGGCG CAGGTGCGCT ACATGCCCGG TGCCAACAGC
CGCTCGGTGC TGTTCTATGC GCCGTTTCCG CTCACCATCG CCAAGGGCGA GGGCGCTGCG
CTCTGGGATG CCGACGGCCA CCGCTATGCC GACTTCATCG CCGAATACAC GGCCGGCGTC
TACGGCCACT CGGCACCCGA GATCCGCGAT GCCGTCGTCG AGGCAATGCA GGGTGGCATC
AACCTCACGG GCCACAACCT GCTCGAAGGA AGGCTCGCCA AGACCATCTG CGAGCGCTTT
CCGCAGATCG AGCAATTGCG CTTCACCAAC TCGGGCACCG AGGCCAACCT GATGGCGCTC
ACGGCCGCGC TGCACTTCAC GGGGCGGCGG AAGATCGTGG TGTTTTCGGG CGGCTACCAC
GGCGGCGTGC TCGGGTTCGG CGCCAAGCCG CTGCCGACGA CCGTGCCCTT CGACTTCCTG
GTGCTGCCCT ACAACGATGT GCAGGCTGCG AGCGAACAGA TCGAGAAGCA CGGGTCGGAG
ATCGCCGCGA TCCTGGTCGA GCCGATGCAG GGTGCGAGCG GCTGCATTCC GGGGCGCCTC
GACTTTCTGC AAGCACTTCG CGAGGGTGCG ACGAAGGTGG GCGCGCTGCT GGTCTTCGAC
GAGGTCATGA CCTCGCGCCT CGCACCGAAC GGCCTCGCCA ACAAGCTGGG CATCCGGTCG
GACCTGACCA CGCTGGGCAA GTACATCGGC GGCGGCATGT CGTTCGGCGC TTTCGGCGGG
CGCTCGGACG TGATGGCGCA GTTCGATCCG CGCACCGGGT CGCTCTCCCA TTCGGGCACC
TTCAACAACA ACGTGATGAC CATGGCGGCC GGCTATGCGG GCCTCACGAA GCTGTTCACG
CCCGAGGCGG CAGGCAGGCT GGCCGAGCGC GGCGAGGCGA TGCGTGCGCG GCTCAATGCG
CTGTGTGCGA AAGAGGATGT GGCCATGCAG TTCACCGGCG TCGGTTCGCT GATGAACGCA
CATTTCGTGC GCGGGGAAGT GCGGCGCGTG GACGACCTGG CGGCGGTCGA CGGGCGGCTG
CGGCAGTTGC TGTTCTTCCA CCTGCTGGGC GAGGGCATCT ACGCCTCGCC GCGCGGCTTC
ATCGTGCTGT CTCTGCCGCT GACCGATGCG GACATCGACC GGTTCGCCGC CGCCATCGGC
CGCTTCATCG GCGAATACCG CGCGCTGCTG CCTAGCGCGA AGTAG
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| Protein sequence | MSDSAIDQSL AQAFQRFTEA NPASRRQFEA QVRYMPGANS RSVLFYAPFP LTIAKGEGAA
LWDADGHRYA DFIAEYTAGV YGHSAPEIRD AVVEAMQGGI NLTGHNLLEG RLAKTICERF
PQIEQLRFTN SGTEANLMAL TAALHFTGRR KIVVFSGGYH GGVLGFGAKP LPTTVPFDFL
VLPYNDVQAA SEQIEKHGSE IAAILVEPMQ GASGCIPGRL DFLQALREGA TKVGALLVFD
EVMTSRLAPN GLANKLGIRS DLTTLGKYIG GGMSFGAFGG RSDVMAQFDP RTGSLSHSGT
FNNNVMTMAA GYAGLTKLFT PEAAGRLAER GEAMRARLNA LCAKEDVAMQ FTGVGSLMNA
HFVRGEVRRV DDLAAVDGRL RQLLFFHLLG EGIYASPRGF IVLSLPLTDA DIDRFAAAIG
RFIGEYRALL PSAK
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