| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2400 |
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| Symbol | |
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| ID | 7970444 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 2560965 |
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| End bp | 2562305 |
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| Gene Length | 1341 bp |
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| Protein Length | 446 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644792983 |
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| Product | permease for cytosine/purines uracil thiamine allantoin |
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| Protein accession | YP_002944293 |
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| Protein GI | 239815383 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG1457] Purine-cytosine permease and related proteins |
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| TIGRFAM ID | [TIGR02358] probable hydroxymethylpyrimidine transporter CytX |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.603733 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCACACG ACGACGAACT TTCTTCCGCC AACGAGGCGC TGGCGCCCCT GCCCGCGTCG
CAGCGCGTGT TCGGCTGGCA CGACCACGCA TCGCTCTGGT TCAGCCTGGG CGTCGGGCTG
CTGGTGATGC AGATCGGTGC CTACCTGGTG CCGGCGGTGG GCACGCGCGA CGCGGCCATC
GCGATCGTGC TGGGTTCGCT GCTCGGCGCA GGCCTGTTGG CCTGGACTGC GCGGCTCGGC
TGCGAGAGCG GCCTGGCGAG CGCCGGGCTG ATGCACGCCA CCTACGGCAG CGCCTTCGCA
CGGCTGCCGG TGCTGCTCAA CATCGTGCAG CTGGTGGGCT GGACCACCTT CGAGCTCGTC
ATCATGCGCG AAGGCACGCA GGCGATCGGC CAGCAGGCCT TCGGCCTGGC GCTCGGCGGG
CCGCTGGGCG GCGCCCTCAC CACGCTGCTC TGGGGCGCGG TGCTGCTGGC GCTTTTGGCC
GGCTCCATGG TCAAGCTGGT GCGGCGCTTC GTGAGCCGCT TCGGCCTGCC GCTGGTGGTG
CTTTCTCTGC TCTGGCTGAC CTGGCAGTTC GCGACGCGCC TGCAAGCCAA GGGCCTCGAC
GCCTTCTGGG CGCGCCCCGG CGACGGCGGC ATGGGCATGT TCAGCGCGCT CGACCTGGTG
ATTGCGATGC CGGTCTCGTG GCTGCCGCTG GTGGCCGACT ACGCGCGCCA CGGCAAGCGC
AGCGCAGGCG GCCTGGGCAG CGCCTTCAGC GGCACCTGGA TCGGCTATGC GCTGGCCAAC
GTCTGGTGCT ATGCGCTCGG CGTGATGGTG GTGAGCGTGG CGGAGCCGGG CACCGGCCTG
GTCACCGCGC TGCTGCTCGC CCAAGGCGGC CTGGTGGCGC TGGGCCTGAT CCTGATCGAC
GAGCTCGACA ACGCGTACGG CGATGTGTAT TCGGGCTCGG TGTCCACCCA TAGCCTGCTG
CCGCGCTGGA GCGTGCGGCG CTGGGGCCTC CTGCTGGCGG CGCTGTGCAC GGCGCTCGCG
CTGGTGCTGC CGATGCACAC GCTCGAGCCG TTCCTGCTGA TGCTGAGTTC GGTGTTCGTG
CCGCTCTACG GCGTAATCCT GGGGCGGCTG GGCACGGGCC AGGCGGTCTT GTCGGTGGGC
ACGCGCCGGG TCGACCTGGG CGCGGCGCTG ATCTGGATTG CGGGCATCGC GGCCTACCAC
GCGCTCGCCA AGTGGGCGCC GCAATTCGGC TCGGCGCTGC CCACGCTGGC CGCGACATTC
CTGCTGGCCT GGGCCAGCCG GCCCAAGGCT ACGCCGACGG CGGCAGGCGG TGCGTCGGCA
CTGGCGCAAA ACCGTGGTTG A
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| Protein sequence | MAHDDELSSA NEALAPLPAS QRVFGWHDHA SLWFSLGVGL LVMQIGAYLV PAVGTRDAAI
AIVLGSLLGA GLLAWTARLG CESGLASAGL MHATYGSAFA RLPVLLNIVQ LVGWTTFELV
IMREGTQAIG QQAFGLALGG PLGGALTTLL WGAVLLALLA GSMVKLVRRF VSRFGLPLVV
LSLLWLTWQF ATRLQAKGLD AFWARPGDGG MGMFSALDLV IAMPVSWLPL VADYARHGKR
SAGGLGSAFS GTWIGYALAN VWCYALGVMV VSVAEPGTGL VTALLLAQGG LVALGLILID
ELDNAYGDVY SGSVSTHSLL PRWSVRRWGL LLAALCTALA LVLPMHTLEP FLLMLSSVFV
PLYGVILGRL GTGQAVLSVG TRRVDLGAAL IWIAGIAAYH ALAKWAPQFG SALPTLAATF
LLAWASRPKA TPTAAGGASA LAQNRG
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