Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_2399 |
Symbol | |
ID | 7970443 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 2560154 |
End bp | 2561017 |
Gene Length | 864 bp |
Protein Length | 287 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644792982 |
Product | phosphomethylpyrimidine kinase |
Protein accession | YP_002944292 |
Protein GI | 239815382 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0351] Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase |
TIGRFAM ID | [TIGR00097] phosphomethylpyrimidine kinase |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.943735 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCCAAG CACTTTCCGA CGCGCCCCAG GGGCCCCTGC GCTACGCACG CGTGCTCTCG ATCGCCGGCT CCGACAGCGG CGGCGGTGCC GGCATCCAGG CCGACCTGAA GACCTTCGCG GCGCTCGGCT GCTACGGCAT GACGGCCATC ACGGCGCTCA CCGCGCAGAA CACGCTCGGC GTGTCGGGCA TCCATGGCGT GCCGCCGGCT TTCCTCAAGG CGCAGATCCA GGCGGTGGTC GAGGACATCG GCGTGGATGC GGTCAAGCTC GGCATGCTGC ATGCGCCCGA GGTGGTCGAG GTGGTGGCCT GGGCCATCGA TCACTACCGG CTGCCCAACG TAGTGCTCGA CCCGGTGATG GTCGCCACCA GCGGCGACCG CCTGATCGCC TCCGAAACCG TGCAGGTGCT GGTGCGCGAG CTGTTCCCGC GCGCCGTGGT GGTCACGCCC AACCTCGACG AAGCGGCCTT GCTGATCGGC CATGCGATCG GCGGCATCGA TGCCCTCGAC GATGCGGCCA ACGAACTGCT GGCGCTCGGC GCGCAGGCCG TGCTGCTCAA GGGCGGGCAC TTGCCGGGCG ACGAGGTGGT CGACGTGCTG CTGCAGGCGG GCGGCGCTCG AAAGCGGCTG GCCTCGCAGC GCATCGCGAG CCGCAACCTG CATGGCACGG GCTGCACGCT GTCGTCCGCC ATTGCCGCGC ACCTGGCGCT GGGGCTTGCG TTGCCCGAGG CCGTCGAATG CGCGCGCGCC TACATCCTCG GCGCGATGGC CGCCGGTGCG CATGTGAAGA CCGGCGCGGG ACACGGTCCG CTCAACCACG GTTTTGCGCC AGTGCCGACG CACCGCCTGC CGCCGTCGGC GTAG
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Protein sequence | MTQALSDAPQ GPLRYARVLS IAGSDSGGGA GIQADLKTFA ALGCYGMTAI TALTAQNTLG VSGIHGVPPA FLKAQIQAVV EDIGVDAVKL GMLHAPEVVE VVAWAIDHYR LPNVVLDPVM VATSGDRLIA SETVQVLVRE LFPRAVVVTP NLDEAALLIG HAIGGIDALD DAANELLALG AQAVLLKGGH LPGDEVVDVL LQAGGARKRL ASQRIASRNL HGTGCTLSSA IAAHLALGLA LPEAVECARA YILGAMAAGA HVKTGAGHGP LNHGFAPVPT HRLPPSA
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