| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2397 |
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| Symbol | |
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| ID | 7970441 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 2558722 |
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| End bp | 2558925 |
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| Gene Length | 204 bp |
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| Protein Length | 67 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644792980 |
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| Product | thiamine biosynthesis protein ThiS |
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| Protein accession | YP_002944290 |
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| Protein GI | 239815380 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG2104] Sulfur transfer protein involved in thiamine biosynthesis |
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| TIGRFAM ID | [TIGR01683] thiamine biosynthesis protein ThiS |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACGATGA ATGTCCTGAT CAACGACAAG CCCTACACGC TGCCGGACGG CGCCACCGTG
GTCGACGCGC TGGCCGCACT CGATGCGGTG CCGCCGTTCG CGGTGGCCGT GAACCGCGAG
TTCGTGCCGC GCTCGGCCCA TGCGGCGCGC GCGCTGCAGC CCGAAGACCG CATCGAAGTG
ATCCGCCCCG TGACCGGCGG CTGA
|
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| Protein sequence | MTMNVLINDK PYTLPDGATV VDALAALDAV PPFAVAVNRE FVPRSAHAAR ALQPEDRIEV
IRPVTGG
|
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