| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2395 |
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| Symbol | |
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| ID | 7970439 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 2556939 |
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| End bp | 2557868 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644792978 |
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| Product | thiamine-phosphate pyrophosphorylase |
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| Protein accession | YP_002944288 |
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| Protein GI | 239815378 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0352] Thiamine monophosphate synthase |
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| TIGRFAM ID | [TIGR00693] thiamine-phosphate pyrophosphorylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGCTT CGACAGACGC CCGCGCCATC TCGCAGGCCA TCGTCGCGAC GCACGGGCTG
CGCTTCGGCA CCAACATGCC CGCGGCCATT TCAGCGGGCC GCTTTTCCTC GGACGAGCCG
GTGTACCGCG GCGCAAAGCA GGCCTGCACG GCGCTCGGCT TCATCGAGAT CGATGCCGAA
TGCCTGGCAC GCGCCTGGCA GGCGCAGACG GCGCGCACCG GTGCTTTCGA TGCCAACCAG
TGGCCCGAAA CGCCCGTCGA TTTCGGTATG CGCGCGTTCC CGCCCACCGA ACGCGACGAC
GCCTTCGCGC CCTGCCCCGA ACGGCTCGGC CTCTACGCCG TGCTGCCCGA TGCGCAATGG
GTCGGCCGCA TGGCGCGCGC CGGCGTTCCC ACGGTGCAGC TGCGCTTCAA GTCGGACGAC
GCGGCAGCCA CCGAGCGCGA AGTGCATTCG GCCGTCGACG CGGTGCGCGG CACCGGCGCG
CTGCTCTTCA TCAACGACCA CTGGCAGACG GCCATTGCCG CGGGTGCCTA CGGCGTGCAC
CTGGGCCAGG AAGACCTCGA CGCGCTCGCG CCCGAACAGG TGCAGCAGAT CCGCGATGCG
GACCTGCGGC TCGGCGTCAG CACCCACGGC TATGCCGAGA TGGTGCGCGC CGATGCGGTG
AGCCCGAGCT ACATCGCGAT GGGCGCGGTG TATCCGACCA CCCTCAAGAA GATGGCGACC
GCACCGCAGG GCGTGGCGCG GCTAGCGGCC TATGCGCGCC TGCTGCGCGG CTATCCGCAG
GTGGGCATCG GTGGCATCGA CGCTGTGCGG CTGCCCGAGG TGCTGGCCAC CGGCGTCGGC
TCCGTCGCCG TGGTGCGCGC GCTTGTCGCC GCAGAAGATC CCGAGGCCAC GGCCGCGCAA
TGGATGGCGT CGATAGCCGC CGCCACATGA
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| Protein sequence | MSASTDARAI SQAIVATHGL RFGTNMPAAI SAGRFSSDEP VYRGAKQACT ALGFIEIDAE
CLARAWQAQT ARTGAFDANQ WPETPVDFGM RAFPPTERDD AFAPCPERLG LYAVLPDAQW
VGRMARAGVP TVQLRFKSDD AAATEREVHS AVDAVRGTGA LLFINDHWQT AIAAGAYGVH
LGQEDLDALA PEQVQQIRDA DLRLGVSTHG YAEMVRADAV SPSYIAMGAV YPTTLKKMAT
APQGVARLAA YARLLRGYPQ VGIGGIDAVR LPEVLATGVG SVAVVRALVA AEDPEATAAQ
WMASIAAAT
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