| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2390 |
|---|
| Symbol | |
|---|
| ID | 7970433 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Variovorax paradoxus S110 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012791 |
|---|
| Strand | + |
|---|
| Start bp | 2552687 |
|---|
| End bp | 2552998 |
|---|
| Gene Length | 312 bp |
|---|
| Protein Length | 103 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 644792972 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002944283 |
|---|
| Protein GI | 239815373 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4680] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCACGTAG TCGCAAACTC GAACCTCATC GGTTTCTACC AAGATCCGAG TTATCGAGAT
GCCGAACCCG GATTAAGGGC GTGGTACGAA GAGGCAAAAA ATGCAAAGTG GACGACACCC
GCTGTCGTGA AGGCCCAGTA CGCCAACGCC AGCATCATTG CGAACAACCG CGTGGTGTTC
AACATCAAGG GGAACGACTA CCGCCTGATC GTCGCCATCG CCTACAGGAT GCAGTACGTC
TTTATCAAGT TCATCGGTAC GCACGCGCAA TACGACCAGA TCGATGCTGC GACCGTCGAC
CAGTTCAAAT AA
|
|---|
| Protein sequence | MHVVANSNLI GFYQDPSYRD AEPGLRAWYE EAKNAKWTTP AVVKAQYANA SIIANNRVVF
NIKGNDYRLI VAIAYRMQYV FIKFIGTHAQ YDQIDAATVD QFK
|
|---|
| |