| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2380 |
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| Symbol | |
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| ID | 7970423 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 2544469 |
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| End bp | 2545371 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644792962 |
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| Product | transcriptional regulator, AraC family |
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| Protein accession | YP_002944273 |
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| Protein GI | 239815363 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0838291 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCGTCA CCACCGAACT GCAGACCGAT GCGATCCGCG TGTCGAGCTA CCGCTGCGAC
GCCCAGCCTG GCGCGCGGCC GTTCACCGAG GTGCACGCCG AGTATTCGGT CTCGTACGTG
CGCAAGGGCA GCTTCGGCTA CCGCACGCGC GGCAATGCTT ATGAACTGGT GGCCGGCTCC
GTGCTGGTGG GTTGCCCGGG CGATGAATAC GTCTGCACTC ACGACCACCA TGTCTGTGGC
GACGAATGCC TGGCGTTCCA TTTGTCGCCG GGCTTCGTCG ACCTGGTCGG CGGCGACCAG
CGGACCTGGC GCACGGCAGG GCTTCCGCCG CTGCCCGAGC TGATGGTGCT CGGCGAGCTT
GCGCAGGCCG CGGCCGAGGG GCGCAGCGAT GCAGGCCTCG ACGAGCTGGG CGTGTGCTTC
GCGAGCCGTT TCGTCGAGGT GGTGGAAGGG CGCAGCAAAC CCGCGCCGCA ATCCGCTGCG
GCACGCGACA GGCGCCGTGC GGTCGACGCG GCGATGTGGA TCGACGCGAA CTCGCACGGC
GATATCGGCC TCGAAACCGC GGCCTTCGAA GCGGGACTGA GTCCGTTCCA CTTCCTGCGC
CTGTTCTCGC AGGTGCTCGG CGTCACGCCG CACCAGTACC TGGTCCGTTC GCGCCTGCGC
CACGCGGCGC GGCTGCTGGC GGACGACGAC CGGCCCGTGA CCGACGTGGC CTTCGAGGTC
GGCTTTGCCG ACCTGAGCAA CTTCGTTCGC ACCTTCCACC GCGCGGCCGG GGTATCGCCG
CGCGGCTTTC GCCAGGCCGC CAAGGGCGAC CGCAAGATTT TCCAAGACCG CCTGGCCGCA
CTGTTCGATG ATGACCGCCT GATCCACCCA TCGAGCAGAA AGCCATCGCC ATGTACGACC
TGA
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| Protein sequence | MLVTTELQTD AIRVSSYRCD AQPGARPFTE VHAEYSVSYV RKGSFGYRTR GNAYELVAGS
VLVGCPGDEY VCTHDHHVCG DECLAFHLSP GFVDLVGGDQ RTWRTAGLPP LPELMVLGEL
AQAAAEGRSD AGLDELGVCF ASRFVEVVEG RSKPAPQSAA ARDRRRAVDA AMWIDANSHG
DIGLETAAFE AGLSPFHFLR LFSQVLGVTP HQYLVRSRLR HAARLLADDD RPVTDVAFEV
GFADLSNFVR TFHRAAGVSP RGFRQAAKGD RKIFQDRLAA LFDDDRLIHP SSRKPSPCTT
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