| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2375 |
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| Symbol | |
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| ID | 7970418 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 2538258 |
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| End bp | 2539442 |
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| Gene Length | 1185 bp |
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| Protein Length | 394 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644792957 |
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| Product | peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 |
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| Protein accession | YP_002944268 |
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| Protein GI | 239815358 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1686] D-alanyl-D-alanine carboxypeptidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.011571 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCGAAA CCCGCCCCCG CCGAGTTTCC AGCCAGCGGT TCTTGCCCGC AGTCAAATTC
GTCGCCGTCG CGCTCTGCGC CACGGCGTTT TTGCTGTCCG GTGCACAGGC CGCCAAGAAG
GAAAAAACAA CCGCAGCCAA GACCTCCGTG GCCAAGAAGT CCGCAGGACC GGTGCCGGTG
GAAGTCAAAC GCTCCGGCAA GGCGCCGCGT GGCGTCAAGG TCGCCGACAG AAGCGAGAAG
GTCGTCCGTG GCGGCCGCAA CGTGGTGGCT TCCATTCGCC AGAAGAACGG CAAGACCGTG
GTTGCCGTGC AGCGACGCTC GGTGGTTCGC GTCGAAACGC CGGCGCGCCA GTCCTTCGGG
CAACTGGCCG GCCTGCACGG AACCGACGAC GCGCTCGACC TGAAGTCGAG CGTTGCGCTG
GTGATCGACC AGGACACGCA CGAAGTGCTG TTCAGCAAGA ACGACCATGC GGTGCTCCCG
ATCGCATCGC TCACCAAGCT GATGACCGGC CTCCTGATCA GCGAAGCGCA TCTGCCCAAC
GACGAACTGA TCACCATCAC GCAGGACGAC GTCGACACCG AAAAAGGCAG CCGTTCGCGC
CTGACGGTCG GCACCACGCT GTCGCGTGGC GAGCTCCTGC ACCTGGCCCT GATGTCGAGC
GAGAACCGTG CGGCGCATGC ACTGGGCCGC ACCTATCCCG GCGGCCTCGC AACCTTCGTG
AGCATCATGA ATGCCAAGGC GAAGATGCTC GGCATGAAGG ACACGCGCTA CGTGGAGCCC
ACCGGCCTGT CGAGCCGCAA CCAGTCGAGC GCGCAGGATC TCGCGCTGCT CGTCAATGCC
GCCTATTCCG ACGCCACGGT GCGCTCGCTG TCGACCTCGC CTGAATACCA GGTCGAGGTG
GGCAACCGCG TGCTGCAGTT CAACACCACC AACCGTCTCG TGAAGAGTCC GGATTGGGAA
ATCGGCGTGC AGAAGACGGG CTACATCTCC GAAGCCGGCC AGTGCCTCGT GATGCAGGCC
AAGGTGGCGG GGCGCAAGCT GATCATGGTG TTCCTGGATT CGGCCGGCAA GTTCAGCCGC
ATTGCCGATG CGGAACGTGT TCGCCGCTGG GTCGAGGCCA CGCACGCCTC GACGGGCTCG
CCGGCTGCAT CGCGCAGCAC TGCGGCCTAC CAGGTCGCCG GCTGA
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| Protein sequence | MPETRPRRVS SQRFLPAVKF VAVALCATAF LLSGAQAAKK EKTTAAKTSV AKKSAGPVPV
EVKRSGKAPR GVKVADRSEK VVRGGRNVVA SIRQKNGKTV VAVQRRSVVR VETPARQSFG
QLAGLHGTDD ALDLKSSVAL VIDQDTHEVL FSKNDHAVLP IASLTKLMTG LLISEAHLPN
DELITITQDD VDTEKGSRSR LTVGTTLSRG ELLHLALMSS ENRAAHALGR TYPGGLATFV
SIMNAKAKML GMKDTRYVEP TGLSSRNQSS AQDLALLVNA AYSDATVRSL STSPEYQVEV
GNRVLQFNTT NRLVKSPDWE IGVQKTGYIS EAGQCLVMQA KVAGRKLIMV FLDSAGKFSR
IADAERVRRW VEATHASTGS PAASRSTAAY QVAG
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