| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2368 |
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| Symbol | |
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| ID | 7970411 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 2529836 |
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| End bp | 2531620 |
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| Gene Length | 1785 bp |
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| Protein Length | 594 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644792950 |
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| Product | acetolactate synthase 3 catalytic subunit |
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| Protein accession | YP_002944261 |
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| Protein GI | 239815351 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | [TIGR00118] acetolactate synthase, large subunit, biosynthetic type |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAATCT CGAAGGCGGA ACTCGCTTCC GCAGCAGCCG CGTCCTCTGG CGCCGGCAAC
CCAACGCAAG AACTCATGGG CGCTGAAGTG CTGGTCAAGG CACTGCAGGC CGAAGGCGTC
CAGTACATCT GGGGCTATCC CGGCGGCGCG GTTCTGTACA TCTACGACGC GTTCTACAAG
CAGGACACCA TCCAGCACGT GCTGGTGCGC CACGAGCAGG CAGCCGTCCA CGCGGCCGAC
GGCTATGCGC GCGCCACCGG CGAGGTCGGC GTGGCGCTGG TTACCTCGGG CCCCGGCCTC
ACGAATGCCG TCACCGGCAT CGCCACGGCG TACATGGACT CGATCCCGAT GGTGATCATC
TCGGGCCAGG TACCCACCGC CGCCATCGGC CTGGACGCCT TCCAGGAATG CGACACCGTG
GGCATCACCC GCCCCATCGT GAAGCACAAC TTCCTCGTCA AGGATCCGAA GGATCTGGCC
ATGACGATGA AAAAGGCCTT CCACATCGCA CGCAGCGGCC GCCCCGGCCC GGTGGTGGTG
GACGTGCCCA AGGACGTTTC CTTCAAGAAG ACCCCGTATG CCGGCTATCC CGACAAGGTC
GAGATGCGCT CGTACAACCC GGTGCGCAAG GGCCACGGCG GTCAGATCCG CAAGGCGCTG
CAGCTGCTGC TGAACGCCAA GCGCCCCTAC ATCTACACGG GCGGCGGCGT GCTGCTGGGC
AACGCCTGCA ACGAACTGCG CACGCTGGTC GACATGCTCG GCTACCCGGT CACCAATACG
CTGATGGGCC TGGGCGCCTA TCCGGCGAGC GACCGCAAGT TCCTGGGCAT GCTGGGCATG
CACGGCACCA TCGAAGCCAA CAACGCCATG CAGAACTGCG ACGTGCTGCT GGCCGTGGGC
GCGCGCTTCG ATGACCGCGT GATCGGCAAT CCCAAGCACT TCGCGACGAA CGAACGCAAG
ATCATCCACG TCGACATCGA TCCGTCGAGC ATCTCCAAGC GCGTGAAGGT CGACATCCCG
ATCGTCGGCG ACGTGAAGGA CGTGCTCACC GAGCTGATCT CGATGATCCG CGAGAGCACC
ACCAAGCCCG ACGCCGGCGC GCTGGCCGAC TGGTGGAAGA CCATCGAGGC CTGGCGCTCG
CGCGACTGCC TCAAGTACGA CCGCGGCAAC AAGGACGTGA TCAAGCCGCA GTACGTGGTC
GAAACGCTCT GGAACATGAC CAAGGACGCC GACGCGTACA TCACCTCGGA CGTGGGCCAG
CACCAGATGT GGGCGGCGCA GTACTACCGC TTCGACGAGC CGCGCCGCTG GATCAATTCG
GGTGGCCTGG GCACCATGGG CGTGGGCATT CCGTACGCCA TGGGCATCAA GCTCGCCAAG
CCCGATTCGG AAGTGTTCAC CATCACCGGC GAAGGCTCGG TGCAGATGTG CATCCAGGAG
CTCTCCACCT GCCTGCAGTA CAACACGCCG ATCAAGATCT GCTCGCTCAA CAACCGCTAC
CTGGGCATGG TGCGCCAGTG GCAGGAGATC GAATACTCCG GCCGCTATAG CCACAGCTAC
ATGGATGCGC TGCCCAATTT CGTGAAGCTG GCCGAGGCCT ACGGGCACGT CGGCATGCTG
ATCGAACGTC CACAGGACGT GGAGCCGGCG CTGCGCGAAG CACGCAAGCT CAAGGACCGC
ACGGTGTTCA TGGACTTCCG CACCGACCCC ACCGAGAACG TGTTCCCGAT GGTCAAGGCC
GGCATGGGCA TCACCGAGAT GCTGCTGGGC TCCGAAGACC TCTGA
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| Protein sequence | MEISKAELAS AAAASSGAGN PTQELMGAEV LVKALQAEGV QYIWGYPGGA VLYIYDAFYK
QDTIQHVLVR HEQAAVHAAD GYARATGEVG VALVTSGPGL TNAVTGIATA YMDSIPMVII
SGQVPTAAIG LDAFQECDTV GITRPIVKHN FLVKDPKDLA MTMKKAFHIA RSGRPGPVVV
DVPKDVSFKK TPYAGYPDKV EMRSYNPVRK GHGGQIRKAL QLLLNAKRPY IYTGGGVLLG
NACNELRTLV DMLGYPVTNT LMGLGAYPAS DRKFLGMLGM HGTIEANNAM QNCDVLLAVG
ARFDDRVIGN PKHFATNERK IIHVDIDPSS ISKRVKVDIP IVGDVKDVLT ELISMIREST
TKPDAGALAD WWKTIEAWRS RDCLKYDRGN KDVIKPQYVV ETLWNMTKDA DAYITSDVGQ
HQMWAAQYYR FDEPRRWINS GGLGTMGVGI PYAMGIKLAK PDSEVFTITG EGSVQMCIQE
LSTCLQYNTP IKICSLNNRY LGMVRQWQEI EYSGRYSHSY MDALPNFVKL AEAYGHVGML
IERPQDVEPA LREARKLKDR TVFMDFRTDP TENVFPMVKA GMGITEMLLG SEDL
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