Gene Vapar_2358 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_2358 
Symbol 
ID7970401 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp2522229 
End bp2522756 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content62% 
IMG OID644792940 
ProductInorganic diphosphatase 
Protein accessionYP_002944251 
Protein GI239815341 
COG category[C] Energy production and conversion 
COG ID[COG0221] Inorganic pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.607966 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCTTCG ACAAAGTCTC CCCCGGCAAG AACATCCCCG ACGCCTTCAA TGTCGTGATC 
GAAATCCCGA TGAATGCCGA CCCGATCAAG TACGAAGTCG ACAAGGAATC GGGCGCGATC
TTCGTCGACC GCTTCATGAC GACGGCGATG TACTACCCGG CCAACTACGG CTACGTGCCG
CAGACCCTCT CCGGCGACGG CGACCCGGTC GATGTGCTGG TGATCGCGCC GTACCCGCTG
CTGCCGGGCG TGGTCGTGCC CTGCCGCCCC CTGGGCATCC TGATGATGGA GGACGAAGCC
GGCGTCGACG GCAAGGTGCT GGCCGTGCCC ACCGACAAGG TGCTGCCGAT CTACAGCCAC
TGGAAGTCGG TCGACGACGT GAACCCGATG CGCCTGAAGG CCATCAGCCA CTTCTTCGAG
CACTACAAGG ACCTGGAAGC CGGCAAGTGG GTCAAGGTGC TGGGCTGGGA AGGTATCGAC
GCGGCCAAGA AGGAAATCGT CGACGGCATC GCCGCCTACA AGAAGTAA
 
Protein sequence
MSFDKVSPGK NIPDAFNVVI EIPMNADPIK YEVDKESGAI FVDRFMTTAM YYPANYGYVP 
QTLSGDGDPV DVLVIAPYPL LPGVVVPCRP LGILMMEDEA GVDGKVLAVP TDKVLPIYSH
WKSVDDVNPM RLKAISHFFE HYKDLEAGKW VKVLGWEGID AAKKEIVDGI AAYKK