Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_2358 |
Symbol | |
ID | 7970401 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 2522229 |
End bp | 2522756 |
Gene Length | 528 bp |
Protein Length | 175 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 644792940 |
Product | Inorganic diphosphatase |
Protein accession | YP_002944251 |
Protein GI | 239815341 |
COG category | [C] Energy production and conversion |
COG ID | [COG0221] Inorganic pyrophosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.607966 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCTTCG ACAAAGTCTC CCCCGGCAAG AACATCCCCG ACGCCTTCAA TGTCGTGATC GAAATCCCGA TGAATGCCGA CCCGATCAAG TACGAAGTCG ACAAGGAATC GGGCGCGATC TTCGTCGACC GCTTCATGAC GACGGCGATG TACTACCCGG CCAACTACGG CTACGTGCCG CAGACCCTCT CCGGCGACGG CGACCCGGTC GATGTGCTGG TGATCGCGCC GTACCCGCTG CTGCCGGGCG TGGTCGTGCC CTGCCGCCCC CTGGGCATCC TGATGATGGA GGACGAAGCC GGCGTCGACG GCAAGGTGCT GGCCGTGCCC ACCGACAAGG TGCTGCCGAT CTACAGCCAC TGGAAGTCGG TCGACGACGT GAACCCGATG CGCCTGAAGG CCATCAGCCA CTTCTTCGAG CACTACAAGG ACCTGGAAGC CGGCAAGTGG GTCAAGGTGC TGGGCTGGGA AGGTATCGAC GCGGCCAAGA AGGAAATCGT CGACGGCATC GCCGCCTACA AGAAGTAA
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Protein sequence | MSFDKVSPGK NIPDAFNVVI EIPMNADPIK YEVDKESGAI FVDRFMTTAM YYPANYGYVP QTLSGDGDPV DVLVIAPYPL LPGVVVPCRP LGILMMEDEA GVDGKVLAVP TDKVLPIYSH WKSVDDVNPM RLKAISHFFE HYKDLEAGKW VKVLGWEGID AAKKEIVDGI AAYKK
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