| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2354 |
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| Symbol | |
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| ID | 7970397 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 2517494 |
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| End bp | 2518330 |
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| Gene Length | 837 bp |
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| Protein Length | 278 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644792936 |
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| Product | hypothetical protein |
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| Protein accession | YP_002944247 |
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| Protein GI | 239815337 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3687] Predicted metal-dependent hydrolase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.19546 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCGACC TTGTCGTGCG CCGCCTTCTG ATCGACCTGC AAACGCCGTT CGGCCGCAAC
TGGTGCGGCG GCAACGCATT CTCCACCGCC TTTTTCAATG CGCTGTCGAT GAGCTTTCCG
TTCGGCGAGC AGTTCTTCAT CGATGCCGTG CGCGACGCCG CGGCCACGCT GCCGGCGCAA
GCACAGGAAG CGCTTCGCGC CGACGTGCGC GGCTTCATCG GCCAGGAGGC TACGCACCGG
CGCATTCATT CGCTTTTCAA CACCCACCTG CAGGACCAGG GCCTGGTGGA CGGTTGGACT
CCCCGCGCCG CCAGGCGCAT GCAGTTGCTG GAGGGCGCCG ATCCGCGCCA TGCGCTGGCA
GCCACCGCAG CCACGGAGCA CTTCACCGCC ATGTTCGCCG AATGGCTGCT CGCCCACCCC
CAGGTGCTCG ACGGCGCCGA GCCGCGGCTG CGCACCATGT GGCTCTGGCA CAGCGCCGAA
GAGCTGGAGC ACAAGGCCGT GGCGTTCGAC ATCTACCAGG CTGCGCAAGG GTCCGACGCC
TGGCGCAGGC GCTGGTTCCG GCGCGTGACG CTGATGTTCC TGGGCGACCT CATGCGCCAG
ACCGCCGACA ACCTGCGCCG CGAAGGCCAG CTGTGGAAAT GGGCGACCTG GAAGAGCGCC
GCGCGCATCC TGCTTGGCAA AGGCGGCCTG CTCAGAGGCA ACCGGCAGGC CTGGCGCAGC
TACTTTCGCG CCGATTTCCA TCCGGCGCAG CAGGACAGCA GCCTGTCGGC ACGCTGGCTC
GAGAACAACC GCGCACACTA CACGGCGGTA GGCGCGGCGG CCGAGGCTCT TCAGTAG
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| Protein sequence | MADLVVRRLL IDLQTPFGRN WCGGNAFSTA FFNALSMSFP FGEQFFIDAV RDAAATLPAQ
AQEALRADVR GFIGQEATHR RIHSLFNTHL QDQGLVDGWT PRAARRMQLL EGADPRHALA
ATAATEHFTA MFAEWLLAHP QVLDGAEPRL RTMWLWHSAE ELEHKAVAFD IYQAAQGSDA
WRRRWFRRVT LMFLGDLMRQ TADNLRREGQ LWKWATWKSA ARILLGKGGL LRGNRQAWRS
YFRADFHPAQ QDSSLSARWL ENNRAHYTAV GAAAEALQ
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