| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2346 |
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| Symbol | |
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| ID | 7971204 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 2509951 |
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| End bp | 2511525 |
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| Gene Length | 1575 bp |
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| Protein Length | 524 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644792928 |
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| Product | phospholipase D/Transphosphatidylase |
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| Protein accession | YP_002944239 |
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| Protein GI | 239815329 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1502] Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCTCT GGACCCCACT TCTGCGTATC TGTCTTGCCG GCGCCATGGC TGCGGCGCTG
GCGGCGTGCG GCTCGCTGCC GCCGGCGCGC GAGCGGGCGG CGGTGAACGC CGCCGCGGCC
GATCCGTCCA CCACCCTGGC ACGCATCGCA GCCGCCTCGA CGCCGCCGGG CGAGCATTCG
GGCTTCCGGC TGATGCCGCT CGGCGTGTAT TCGCTCGACG CGCGCGTGCA GCTTGCAGAG
CGCGCCCAGC GCTCGCTGGT GGTCCAGTAC TACCAGTTCG AGAACGACGC CACCGGCCGC
CTCCTGATGC GCGCGCTGCG CGAGGCGGCC GGGCGCGGGG TGCAGGTGCG GCTGCTGGTG
GACGATCTCT ACACAGTCAA GAGCCAGCAG CCGCTGCTCG CGCTTTCGGC CACGCCCAAT
GTGCAGGTGC GGCTGTTCAA TCCGTTCTGC TGCGGACGCG GCGGTTTTCT CTCGCGCTTC
GCGGCCTCGC CGCACGAGAT CGGGCGGCTC AACCACCGCA TGCACAACAA GCTCTTCATC
GCCGACGGCG TCATGGCGGT GGTGGGCGGG CGCAACATCG CCGACGAGTA TTTCGTGCTG
AGCGAGGCGC AGAACTTCAT CGACATGGAC GCGCTGGTGG TGGGCAAGGT GCTGCCGCAG
CTCGAATCGA TCTTCGACGC CTACTGGAAC AGCGAGCAGG TCTGGCCCAT TGCCGACATC
GTGCGCGGGG AGGGCGGCCG CACGCCCACG GCCGCCGACT TCGACGCCTG GATCGGCATG
GCCGCGCCGC CGCCGAAGAT CGTGCTGCCG CCGTCCGACG TGCTGGGCTA CGGGCCGATC
GCGGAAGAAC TCGACGGTGG CCGCATGGGC CTGCTGTGGG GCGAGGCCCG CGCGATTGCC
GATCCGCCCA CCAAGCCCGC AACGATGACC GAGGACGAGG CCATTGCCAC CAGCGTGACC
ATGAAGGTCT GGACGCTGCT GATGGACGCC AAGGTCGAGG TCGACCTGAC CTCGCCCTAC
CTGGTGCCCG GCGAGCGCGG CATGGCGGCC TTCGAGGACC TTGCCAGGCG CAAGGTCAAG
CTCACGCTCT TGACCAATTC GCTGGCCGCC AACGACGAGC CGCTGGTGCA CACCGGCTAT
GCGCGCTACC GCGAGCGGCT GCTCAGGAGC GGTGCCGACC TGTACGAGCT GAGCCCGCAG
CGCACCACCG CGGGCGAGCG CTTCGGCATG TTCGGCAAAT CGCTGGGGCG GCTGCACTCC
AAGACCGCCG CCATCGACAA GACCCGCATC TTCATCGGCT CGATGAACCT CGATCCGCGC
TCGGCGAGCC AGAACACCGA GATGGGCGTG GTGGTCGACA GCCCGCAGCT GGCGCGCGAG
ATGCTGCGCG TCATCAACAT CAGCAAGCTG CAGAATTCGT ACCGGCTGCG CATTGCCAAG
GACACCGGCA CGCTGCAGTG GCTCACCACC GATGGCGAGA AGGAAGTCAT CCTCACGTCG
GAGCCGGAAT CGAGCTTCTT CCAGCGCCTC CACAACCTGA TCATTGCACC CCTGGTTCCC
GAAATGCTGC TGTAG
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| Protein sequence | MNLWTPLLRI CLAGAMAAAL AACGSLPPAR ERAAVNAAAA DPSTTLARIA AASTPPGEHS
GFRLMPLGVY SLDARVQLAE RAQRSLVVQY YQFENDATGR LLMRALREAA GRGVQVRLLV
DDLYTVKSQQ PLLALSATPN VQVRLFNPFC CGRGGFLSRF AASPHEIGRL NHRMHNKLFI
ADGVMAVVGG RNIADEYFVL SEAQNFIDMD ALVVGKVLPQ LESIFDAYWN SEQVWPIADI
VRGEGGRTPT AADFDAWIGM AAPPPKIVLP PSDVLGYGPI AEELDGGRMG LLWGEARAIA
DPPTKPATMT EDEAIATSVT MKVWTLLMDA KVEVDLTSPY LVPGERGMAA FEDLARRKVK
LTLLTNSLAA NDEPLVHTGY ARYRERLLRS GADLYELSPQ RTTAGERFGM FGKSLGRLHS
KTAAIDKTRI FIGSMNLDPR SASQNTEMGV VVDSPQLARE MLRVINISKL QNSYRLRIAK
DTGTLQWLTT DGEKEVILTS EPESSFFQRL HNLIIAPLVP EMLL
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