| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2345 |
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| Symbol | |
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| ID | 7971203 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 2509346 |
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| End bp | 2509906 |
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| Gene Length | 561 bp |
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| Protein Length | 186 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644792927 |
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| Product | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen |
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| Protein accession | YP_002944238 |
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| Protein GI | 239815328 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1225] Peroxiredoxin |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCAAGAC CGATCCTCTC ACGCATTGCC CTGATGTCGG TCGCCGCCGG GCTGGCACTG
CCCGCCTGGG CTGCACTGGA CATCGGCGAT CCGGTGCCCA AGTTCACCGC CAACGCCGCG
CTCGGCGGCA AGACCTTCCG CTATTCGCTG GCCGAGGCGC TGGCCAAGGG CCCGGTGGTG
GTGTACTTCT TTCCGGCGGC CGACTCCAGC GATTGTTCGA TCGAAGCGCA TGCCTTCGCC
GAAGCCGTCG ACCAGTTCGC CGCGCTCGGC GCCACGGTCA TCGGCGTGTC GGCCGACGAC
ATCGACACCC TCTCCAAGTT CTCGGTCAAG TCGTGCCAGA GCCGCTTTCC CGTGGCTTCG
GATGAATCCA AATCCGTGAT CAACGGCTTC GACGCCCTGA TGCAGACCCG GCCCGACTTC
GCCAACCGAC TGTCCTACGT GATCGCGCCG AACGGCAAGG TGGCCTATTA CTACCAGAAC
CTGAATCCGG ACAAGCACGT GGAGCGCATG CTCAACGCGG TCCGGGCGCT GCCGCGGCCG
GGCGCAGGCG CACCCCGGTA G
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| Protein sequence | MARPILSRIA LMSVAAGLAL PAWAALDIGD PVPKFTANAA LGGKTFRYSL AEALAKGPVV
VYFFPAADSS DCSIEAHAFA EAVDQFAALG ATVIGVSADD IDTLSKFSVK SCQSRFPVAS
DESKSVINGF DALMQTRPDF ANRLSYVIAP NGKVAYYYQN LNPDKHVERM LNAVRALPRP
GAGAPR
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