Gene Vapar_2340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_2340 
SymbolrnhA 
ID7971198 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp2504201 
End bp2504650 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content64% 
IMG OID644792922 
Productribonuclease H 
Protein accessionYP_002944233 
Protein GI239815323 
COG category[L] Replication, recombination and repair 
COG ID[COG0328] Ribonuclease HI 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.467837 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAACGAAG TCGTGATCTA CACCGATGGT GCGTGCAAAG GCAATCCCGG CCCTGGCGGC 
TGGGGCGCGT GGCTCAAGTC GGGCGCCACC GAAAAGGAAC TGTTCGGCGG CGAACTCAAC
ACCACCAACA ACCGGATGGA GCTCACCGCC GTGATCGAGG GCCTGGCCGC GCTCAAGCGG
CCCTGCAAGG TCATCCTCTA CCTGGACAGC CAGTACGTGC GCATGGGCAT CACCGAATGG
ATCCGCGGCT GGAAGGCCAA GGGCTGGCGC ACCTCGACCA AGCAGCCGGT CAAGAACGTC
GAGCTCTGGC AGAAACTCGA CAAGCTGGTG GCCGAAGGAG GCCACGTGAT CGAATGGCGC
TGGGTCAAGG GCCACTCGGG CGACGTCGGC AACGAGCGTG CCGACATGCT GGCCAACAAG
GGCGTGGACA AGGCGCTGGG CCGGATCTGA
 
Protein sequence
MNEVVIYTDG ACKGNPGPGG WGAWLKSGAT EKELFGGELN TTNNRMELTA VIEGLAALKR 
PCKVILYLDS QYVRMGITEW IRGWKAKGWR TSTKQPVKNV ELWQKLDKLV AEGGHVIEWR
WVKGHSGDVG NERADMLANK GVDKALGRI