Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_2333 |
Symbol | |
ID | 7971191 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 2497592 |
End bp | 2497984 |
Gene Length | 393 bp |
Protein Length | 130 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644792915 |
Product | membrane protein-like protein |
Protein accession | YP_002944226 |
Protein GI | 239815316 |
COG category | [S] Function unknown |
COG ID | [COG3686] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.632219 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTCTTT CCTTGCTCAC CGTCGCCTAC TGGTGCGTGT TCATCGCCTG CGGCCTGCCG TATCTCGCGG CATGGATCGC CAAGGCCGGC AGCTTCGGTC CGCGCGACAA CGTGCAGCCG CGCGACTGGG CCGCAAAGCA GAGCGGCTGG CGCGCGCGCG CCAACAGCGC GCAGGCCAAC AGCTTCGAAG GCCTTCCGTT CTTCATCGGC GCGGTGATCA TTGCGCACCA GCTCGGCGCC AATCAGGCGC GGCTCGACAT GCTGGCGGCG GCCTATGTCG TACTGCGTGC GATCTATATC GCGGTCTATA TCAAGGGCAT CGGCTCCGTG CGCAGCGCGG TATGGGCGCT CGGTTTCGTG GTCAATATCG CGATCCTTTT TATCGCGCGC TAA
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Protein sequence | MTLSLLTVAY WCVFIACGLP YLAAWIAKAG SFGPRDNVQP RDWAAKQSGW RARANSAQAN SFEGLPFFIG AVIIAHQLGA NQARLDMLAA AYVVLRAIYI AVYIKGIGSV RSAVWALGFV VNIAILFIAR
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