Gene Vapar_2333 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_2333 
Symbol 
ID7971191 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp2497592 
End bp2497984 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content64% 
IMG OID644792915 
Productmembrane protein-like protein 
Protein accessionYP_002944226 
Protein GI239815316 
COG category[S] Function unknown 
COG ID[COG3686] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.632219 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTCTTT CCTTGCTCAC CGTCGCCTAC TGGTGCGTGT TCATCGCCTG CGGCCTGCCG 
TATCTCGCGG CATGGATCGC CAAGGCCGGC AGCTTCGGTC CGCGCGACAA CGTGCAGCCG
CGCGACTGGG CCGCAAAGCA GAGCGGCTGG CGCGCGCGCG CCAACAGCGC GCAGGCCAAC
AGCTTCGAAG GCCTTCCGTT CTTCATCGGC GCGGTGATCA TTGCGCACCA GCTCGGCGCC
AATCAGGCGC GGCTCGACAT GCTGGCGGCG GCCTATGTCG TACTGCGTGC GATCTATATC
GCGGTCTATA TCAAGGGCAT CGGCTCCGTG CGCAGCGCGG TATGGGCGCT CGGTTTCGTG
GTCAATATCG CGATCCTTTT TATCGCGCGC TAA
 
Protein sequence
MTLSLLTVAY WCVFIACGLP YLAAWIAKAG SFGPRDNVQP RDWAAKQSGW RARANSAQAN 
SFEGLPFFIG AVIIAHQLGA NQARLDMLAA AYVVLRAIYI AVYIKGIGSV RSAVWALGFV
VNIAILFIAR