Gene Vapar_2332 details

Gene Information

• Locus tag: Vapar_2332
• Symbol: recR
• ID: 7971190
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Variovorax paradoxus S110
• Kingdom: Bacteria
• Replicon accession: NC_012791
• Strand: +
• Start bp: 2496949
• End bp: 2497539
• Gene Length: 591 bp
• Protein Length: 196 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 644792914
• Product: recombination protein RecR
• Protein accession: YP_002944225
• Protein GI: 239815315
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0353] Recombinational DNA repair protein (RecF pathway)
• TIGRFAM ID: [TIGR00615] recombination protein RecR

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCCGACG CCAGTTCGCT CGATGCGCTG GTCGATGCGC TGCGCCGCCT GCCCGGCGTC 
GGCGTCAAGT CGGCCTCGCG CATGGCCTTC CACTTGCTGC AGCACGACCG CGAGGGCGCG 
CAGCTGCTTG CGCGCGCGCT GCAGCAGGCG GCCGGCAACG TGCGGCATTG CGAACGCTGC 
AACACCTTCA CCGAAGCACC GGTCTGCAGC GTGTGCCTCG ACGCGCGCCG CGACGCAAGC 
AAGCTCTGCG TGGTCGAGAC GCCGGCCGAC CAGGCCGCGC TCGAACGCAC CGGGGCCTTC 
CGCGGCTACT ACTTCGTGCT GATGGGCAAG CTCAGTCCGC TCGACGGCAT CGGACCCAAG 
GACATCGGCC TGCAGAAGCT CTTCGACCGC GCGCTGGACG GCACCGTGAG CGAGGTCATC 
CTGGCCACCA ACTTCACGGC GGAGGGCGAA GCCACCGCGC ACGTGATCGG CGAAGCGCTC 
CGGCAGCGCG GCCTCAACGT GACGCGCCTC GCGCGCGGCG TGCCTGCCGG CAGCGAACTC 
GAATACGTGG ATCTCGGCAC CATCGCGCAT GCCCTGGTGG ACCGCCGATA G 

 

Protein sequence

MADASSLDAL VDALRRLPGV GVKSASRMAF HLLQHDREGA QLLARALQQA AGNVRHCERC 
NTFTEAPVCS VCLDARRDAS KLCVVETPAD QAALERTGAF RGYYFVLMGK LSPLDGIGPK 
DIGLQKLFDR ALDGTVSEVI LATNFTAEGE ATAHVIGEAL RQRGLNVTRL ARGVPAGSEL 
EYVDLGTIAH ALVDRR