| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2327 |
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| Symbol | |
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| ID | 7971184 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 2491297 |
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| End bp | 2493213 |
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| Gene Length | 1917 bp |
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| Protein Length | 638 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644792909 |
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| Product | Galactose oxidase |
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| Protein accession | YP_002944220 |
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| Protein GI | 239815310 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCAGCG TTCCATCGCC GCGCGCCGCG CGCGGGCTTG CTTATGCATC CCTGGTGTTC
CTGGTCTGGT CAGGCGGTGA CGCAGGAGGC GGCGCCCGCG CGCAGGGCGA AAATCCGAAG
CTGGCGGGCA CGTCCTCCGC ATCGGCAAGC AAGCCGGTGC CACCAGACGG ACAGCCGGCG
TCCCTCACCA GTCCGTCCCC CGGCACCAAG TTCGCCACCC GCAGCGCGAC CTTCGTCTGG
AACAACACGG GTGCCACCCA GTACGGCTTG ACGATCCTGT CGGCCTCCTC GGCGACACCC
GTGGTGGACA CATCGACAAG TGCGACAACG CTGACGGTGA CCAACCTTCC CATCGACGGC
GCGGGGCTCG TGGTCCGGCT GCGCTCCCGA TTCAAGGGGA AGTGGCTGCC GGCCAACGAG
TACCTGTTCA CGGCAGCCGG ATACACCGCG GCGCAATCGA CCGCCGCGGT GAAGCCCTGG
TCCGATCTGA TTGCGCTGCC ACTCGTGCCC GCATCGGCCG CCAACCTCCC CGACGGCAGG
CTGCTGCTGT GGGCAGCCCG CTCGCCCACC AGCTTCAGCA CGAACAGCAG CGAGGCGTAC
ACCTACACCT CGGTGTTCGA CCCCGTCACG CGAAGCGCCA GCCCGCTGGT GGTCACGGCC
ACAGGCCACC AGATGTTCTG CCCTGGCCTG AGCATGCTGG CCGATGGCAG CGTGCTGGTC
AGCGGCGGCA GCGATGCGAC GAAGACCTCG ATCTACGACC CGGCGCTGGG CGGCTGGGTG
ACGGGTGCGC AACTCGGCAT TGCACGTGCC TACCAGGCGA GCACGACGAT GTCCGACGGC
TCCGTGTTCA CAGTCGGCGG TTCGTGGAAC GGCGGGCAGG GCGGCAAGTA CGGCGAGGTG
TGGTCGGCCG CCACCAAGAC CTGGCGCACG CTGTCCGGCA TACCGGCCAA CATGCCCGAC
GCGAGCAATG TCTCGGACCC GCCGCTGGCC GGCCCGGACG CGGCCGGGGT CTACCGGGGC
GACAACCACA TGTGGCTGTT CGGCGCCGCC AACGGCTGGG TATTCCACGC CGGGCCTGCT
GCCGCAATGC ATTGGATCGA CACGCGCGGC AGCGGCGCCA TCCTGCAGGC CGGGCTACGC
AGCGACGATC CCTATGCCAT CACCGCCAGC GCCGTGATGT ACGACATCGG CAAGATCCTC
AAGCTCGGCG GCGCGCCCAA CCACGACAGC GGCGACGCCT TCAAGACCGC CTACATCATC
GACATCAGCG CGGGCGCGCC GGCGGCGCCC ACGGTGCGCA AGCTTTCGCC GATGGCCTAT
GCCCGAACCT TCGTCAACAG CGTGGTGCTG CCGAACGGCG AGGTGTTCGT GATAGGCGGA
CAGACGCAGC CCGTTCCGTT TTCCGACTCC TACAGTGTGC TGGCGGCCGA GCTGTGGAGC
CCGGTGCTGG AGAGCTTCAT CACGGTGCCG CCGATGCAGA AACCGCGCAA CTATCACAGC
GTGGCCCTGC TGCTGCTGGA CGGACGCGTG CTGGCGGGCG GCGGCGGGCT GTGCGACTGT
GCGGGCGACC ACCCGGATGC GGAGATCTAC ACGCCACCGT ACCTGCTGGC GAGCGACGGT
TCGCCGGCGT CCCGCCCGGC CATCACGGCC GCGCCGGCCA GCGCCACATG GGGGAGCCAG
ATCACCGTGG CGACTGACCG CGCGGCGGCC CAGTTTGCGC TGGTGCGCAT GGCATCGGCC
ACTCACTCGG TCAACACCGA TCAGCGCCGC ATCCCGCTGT CATTCACGGG CACGGCAGGC
AACTACCAGC TGGGCATTCC GACCGATCAC GGGACCGTGC TGCCGGGCAA CTACATGCTG
TTCGCACTCG ACAGCAGCGG CGTGCCGAGC GTGGCGCGCA CCATCAACAT CCGGTAG
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| Protein sequence | MTSVPSPRAA RGLAYASLVF LVWSGGDAGG GARAQGENPK LAGTSSASAS KPVPPDGQPA
SLTSPSPGTK FATRSATFVW NNTGATQYGL TILSASSATP VVDTSTSATT LTVTNLPIDG
AGLVVRLRSR FKGKWLPANE YLFTAAGYTA AQSTAAVKPW SDLIALPLVP ASAANLPDGR
LLLWAARSPT SFSTNSSEAY TYTSVFDPVT RSASPLVVTA TGHQMFCPGL SMLADGSVLV
SGGSDATKTS IYDPALGGWV TGAQLGIARA YQASTTMSDG SVFTVGGSWN GGQGGKYGEV
WSAATKTWRT LSGIPANMPD ASNVSDPPLA GPDAAGVYRG DNHMWLFGAA NGWVFHAGPA
AAMHWIDTRG SGAILQAGLR SDDPYAITAS AVMYDIGKIL KLGGAPNHDS GDAFKTAYII
DISAGAPAAP TVRKLSPMAY ARTFVNSVVL PNGEVFVIGG QTQPVPFSDS YSVLAAELWS
PVLESFITVP PMQKPRNYHS VALLLLDGRV LAGGGGLCDC AGDHPDAEIY TPPYLLASDG
SPASRPAITA APASATWGSQ ITVATDRAAA QFALVRMASA THSVNTDQRR IPLSFTGTAG
NYQLGIPTDH GTVLPGNYML FALDSSGVPS VARTINIR
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