| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2326 |
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| Symbol | |
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| ID | 7971183 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 2489978 |
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| End bp | 2491216 |
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| Gene Length | 1239 bp |
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| Protein Length | 412 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644792908 |
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| Product | HI0933 family protein |
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| Protein accession | YP_002944219 |
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| Protein GI | 239815309 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2081] Predicted flavoproteins |
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| TIGRFAM ID | [TIGR00275] flavoprotein, HI0933 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTCTTT CCCAAACCGT CGCCGTGATC GGCGGCGGAC CGGCCGGCCT CATGGCGGCC
GAAGTCCTGA GCGCGTCCGG CGTGCAGGTG CACGTCTACG ACGCCATGCC CTCGGTGGGC
CGCAAGTTCC TGCTGGCTGG CCGCGGCGGG CTGAACCTCA CGCACTCGGA GCCCTTCGAT
GTGTTCATGA GCCGCTTCGG CGAGCGCCGT GCGCAGCTCG AACCGATGCT CGCCCGCTTC
GGTCCGCAGC AGGTGCGCGA ATGGGCGGCC GGCATCGGCA TCGAAACTTT TGTCGGTACG
TCGGGCCGCG TGTTTCCGAC CGACATGAAG GCCGCGCCGC TGCTGCGCGC CTGGCTGCAC
CGGCTGCGCG CGGCGGGCGT GCAGTTCCAC ATGCGCCACC GCTGGCTCGG CGATGCATCG
CTGGCCGCCG CCTCGCTGCG CTTCGCCACT CCCACGGGCG AGGCCCTCGT GAAGGCCGAT
GCGGTGGTGC TCGCGCTCGG TGGTGCGAGC TGGGCGCGGC TGGGTTCCGA TGGCGCATGG
GCGCCGTGGC TGCAGGCGCG CGGTATCGAT GTCGCGCCGC TGCTGCCCGC CAACTGCGGC
TTCGACGGGG CAGGATGGAG CGAGCATTTC GCGAGCCGTT TCGCGGGCCA GCCCTTCAAG
TTGGTTGCGA TTTCGTTCAC CGACAGCCAG GGCCGCCGAT TCGCGCGCAA GGGCGAATTC
GTTGCCACCG CCACCGGCAT CGAAGGCAGC CTGATCTATG CAGCGTCGGC CTTGCTGCGC
GACGAGATCG CCGCGCACGG CAGCGCCACG CTGCTGCTCG ACCTGCTGCC CGACCGCAGC
GCCGAGCAGG TGCTGGCGGC CGTCAAGCAT CCGCGCGGCG CCCGCTCGCT CAGCAGCCAT
CTGAAGAGCC GGCTCGGACT GGAAGGCATC AAGGCCGGCG TGCTGCACGA GGCGCTGGGC
CGCGAAGCGA TGCAAGACCC CGCGCAGCTG GCGGCGACGA TCAAGGCCGT GCCGCTGCGG
CTGGTCGCAA CCCGGCCCAT CGACGAAGCC ATCAGCACCG CAGGCGGCGT GCGCTTCGAG
GCGCTCGACG AAGTGCTCAT GGCCAGCGCG GTGCCGGGCG TGTTCGTGGC GGGGGAAATG
CTCGACTGGG AGGCACCGAC CGGCGGCTAC CTGCTGACGG CGTCAATGGC CAGCGGGGCG
GCCGCGGCGC GGGGCGCGAT CAGGCAGCTG GGCCTTTGA
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| Protein sequence | MTLSQTVAVI GGGPAGLMAA EVLSASGVQV HVYDAMPSVG RKFLLAGRGG LNLTHSEPFD
VFMSRFGERR AQLEPMLARF GPQQVREWAA GIGIETFVGT SGRVFPTDMK AAPLLRAWLH
RLRAAGVQFH MRHRWLGDAS LAAASLRFAT PTGEALVKAD AVVLALGGAS WARLGSDGAW
APWLQARGID VAPLLPANCG FDGAGWSEHF ASRFAGQPFK LVAISFTDSQ GRRFARKGEF
VATATGIEGS LIYAASALLR DEIAAHGSAT LLLDLLPDRS AEQVLAAVKH PRGARSLSSH
LKSRLGLEGI KAGVLHEALG REAMQDPAQL AATIKAVPLR LVATRPIDEA ISTAGGVRFE
ALDEVLMASA VPGVFVAGEM LDWEAPTGGY LLTASMASGA AAARGAIRQL GL
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