Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_2323 |
Symbol | |
ID | 7971180 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 2483636 |
End bp | 2483968 |
Gene Length | 333 bp |
Protein Length | 110 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 644792905 |
Product | thioredoxin |
Protein accession | YP_002944216 |
Protein GI | 239815306 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG3118] Thioredoxin domain-containing protein |
TIGRFAM ID | [TIGR01068] thioredoxin |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCAGCG ACCTGATCAA ACACATCTCC GATTCTTCCT TCGAAGCCGA CGTGCTCAAG TCCAGCCAGC CCGTGCTGGT CGACTACTGG GCCGAATGGT GCGGCCCCTG CAAGATGATC GCACCCATCC TGGATGAAGT GTCGACCGCC TACGAAGGCA AGCTGCAGAT CGCCAAGCTC AACGTCGACG AGAACCGCGA CATCCCGGCC AAGTTCGGCA TCCGCGGCAT CCCCACGCTC ATGCTGTTCA AGGACGGCCA GCTCGCCGCC ACCAAGGTCG GCGCAATGAG CAAGGCGCAG CTCACGGCCT TCATCGACCA GCAGCTCGCC TGA
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Protein sequence | MASDLIKHIS DSSFEADVLK SSQPVLVDYW AEWCGPCKMI APILDEVSTA YEGKLQIAKL NVDENRDIPA KFGIRGIPTL MLFKDGQLAA TKVGAMSKAQ LTAFIDQQLA
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