Gene Vapar_2323 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_2323 
Symbol 
ID7971180 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp2483636 
End bp2483968 
Gene Length333 bp 
Protein Length110 aa 
Translation table11 
GC content62% 
IMG OID644792905 
Productthioredoxin 
Protein accessionYP_002944216 
Protein GI239815306 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3118] Thioredoxin domain-containing protein 
TIGRFAM ID[TIGR01068] thioredoxin 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCAGCG ACCTGATCAA ACACATCTCC GATTCTTCCT TCGAAGCCGA CGTGCTCAAG 
TCCAGCCAGC CCGTGCTGGT CGACTACTGG GCCGAATGGT GCGGCCCCTG CAAGATGATC
GCACCCATCC TGGATGAAGT GTCGACCGCC TACGAAGGCA AGCTGCAGAT CGCCAAGCTC
AACGTCGACG AGAACCGCGA CATCCCGGCC AAGTTCGGCA TCCGCGGCAT CCCCACGCTC
ATGCTGTTCA AGGACGGCCA GCTCGCCGCC ACCAAGGTCG GCGCAATGAG CAAGGCGCAG
CTCACGGCCT TCATCGACCA GCAGCTCGCC TGA
 
Protein sequence
MASDLIKHIS DSSFEADVLK SSQPVLVDYW AEWCGPCKMI APILDEVSTA YEGKLQIAKL 
NVDENRDIPA KFGIRGIPTL MLFKDGQLAA TKVGAMSKAQ LTAFIDQQLA