| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2317 |
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| Symbol | |
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| ID | 7971174 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 2476190 |
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| End bp | 2477485 |
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| Gene Length | 1296 bp |
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| Protein Length | 431 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644792899 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_002944210 |
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| Protein GI | 239815300 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5002] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR02966] phosphate regulon sensor kinase PhoR |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.837858 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGGAGTGG GCGCTGCAGC CATTTTCGGC TGGAAGTTCG GATGGCTGGG TGCCTGGCTG
GGCGCGGTGC TGTGGCTCGC GCTCGACGCC TGGCGGGCCG AGCGCCTGCT CAAGGTGCTT
CGCAACAACG CGGCGGGCCT GCCGACGCGC GGCGCCGGCG TGTGGGGCGA GCTCGCGGAG
CGCATCCGCA AGCTGCTGCG CGACCGCGAA CAGCAGACCC GCCAGGCCGA GGACCGCCTG
CAGGAATTCC TGGCCGCCAT CCAGGCCTCT CCCAACGGCG TGATCCTGCT CGACGAGCAG
GGCCGCATCG AGTGGTGCAA CCAGACGGCA GCCGGGCAGT TCGGCATCGA TGCCGAGCGG
GATCTGCTGC AGCATCTGGC CAATCTGGTC CGCGACCCGG CCTTCGTGGC CTACCTGGCC
TCGTGGAACT ACAGCCGCGA TGTGGTCATC GATGCCTCAG GCCCCGGGCA GGGGCACCAG
CGCAGCCATC CGGTGCGCCT GTCGGTGCAG GTGCATCCCT ATGCGGGCAA CCGCCGCATG
CTGCTGACGC GCGACATCAC GGCGGTCGAG CAGGCCGAGG CCATGCGGCG CGACTTCGTT
GCCAATGTTT CGCACGAGAT CCGCACGCCG CTCACCGTGC TGGCGGGTTT TGTGGAAACG
CTGCAGAACC TGCCGCTCGA TGCGGACGAG CGCGCGCGCT ACCTCTCGCT CATGAGCCAG
CAGTCGCACC GCATGGAAAC CCTGGTCAAC GACCTGCTGA CGCTGTCGCG GCTCGAGGGT
AGCGCGGCGC CATCGGGCAA CCAGTGGATC CGCATCCGTG CGCTGCTCGC CCAGTGCGAA
GACGAGGGAC GGGGCTTGTC GGGCCGGCTC GCGCCGCAGG GGCATCGCCT TTCCTTCACG
ATCGAGGCCG AATCCGAGAT TTCGGGCGCC CCGACAGAGC TGCAAAGCGC CATGTCGAAC
CTGCTGAGCA ACGCCATCCG CTACACGCCC GGCGGCGGCG AGGTCGCGGT GAGCTGGCGG
CTGCTGCCCG ACGGGCGCGG CGAATACGCG GTGCGCGACA CCGGCCCCGG CATTGCCGCC
GAGCACATCC CGCGCCTGAC CGAACGCTTC TACCGCATCG ACCGCAGCCG CTCGCGCGAA
ACCGGTGGCA CCGGCCTGGG CCTGGCCATC GTGAAGCACA TCGCGCAGCG GCATGGCGCC
GAACTGCGGA TCCAGAGCAC GGTGGGCAAG GGCTCGCGTT TCGCGCTGGT GTTCCCGGCA
ACCCGCGTGC GGGAAGCGCG GCTGCTAGCG AAGTGA
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| Protein sequence | MGVGAAAIFG WKFGWLGAWL GAVLWLALDA WRAERLLKVL RNNAAGLPTR GAGVWGELAE
RIRKLLRDRE QQTRQAEDRL QEFLAAIQAS PNGVILLDEQ GRIEWCNQTA AGQFGIDAER
DLLQHLANLV RDPAFVAYLA SWNYSRDVVI DASGPGQGHQ RSHPVRLSVQ VHPYAGNRRM
LLTRDITAVE QAEAMRRDFV ANVSHEIRTP LTVLAGFVET LQNLPLDADE RARYLSLMSQ
QSHRMETLVN DLLTLSRLEG SAAPSGNQWI RIRALLAQCE DEGRGLSGRL APQGHRLSFT
IEAESEISGA PTELQSAMSN LLSNAIRYTP GGGEVAVSWR LLPDGRGEYA VRDTGPGIAA
EHIPRLTERF YRIDRSRSRE TGGTGLGLAI VKHIAQRHGA ELRIQSTVGK GSRFALVFPA
TRVREARLLA K
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