Gene Vapar_2315 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_2315 
Symbol 
ID7971172 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp2474679 
End bp2475380 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content64% 
IMG OID644792897 
Productphosphate uptake regulator, PhoU 
Protein accessionYP_002944208 
Protein GI239815298 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0704] Phosphate uptake regulator 
TIGRFAM ID[TIGR02135] phosphate transport system regulatory protein PhoU 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.23954 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGAAA AACATCTCTC CAGCCAGTTC GACAGCGAAC TCAACGGCGT GTCGTCGCGC 
GTGATGGAGC TCGGCGGCAT GGTCGAGGCG CAGATCCACC AGGCGGTGTA TGCGCTCTTG
CAGTTCGATC CTGACGCTGC CGACCGCGTG ATGGAAACCG AGACGCGCGT CAATGCGATG
GAGATCGAGA TCGACCGCGA GCTGTCGTCG ATCATCGCGC GGCGCCAGCC GACGGCGCGC
GACCTGCGCC TCTTGATCGC CATCTCCAAG ACCACGGCCA ACCTGGAGCG CGTGGGCGAC
GAGGCCAACA AGATCGCGCG CATGGTCAAG TCGATCATCG AGAGCGGCTC GGCCCGCGCG
CTGCCCTCGA ACGAGCTGCG CATCGCGGCC GACCTGGCCT CGGGCCTGCT GCGTACCGCG
CTGGACGCCT TCGCGCGGCT GGACACGGCC GCGGCGCTGT CGATCCTGAA GGACGACGAC
CTGATCGACA AGGAGTTCGA CGGCTTCGTG CGCAAGCTGG TCACCTACAT GATGGAAGAC
CCGCGCACGA TCTCGGCCAG CCTCGACCTG CTGTTCCTGG CCAAGGCCAT CGAACGCATC
GGCGACCACG CCAAGAACAT CGCCGAGTTC ATCATCTACA TCGTCAAGGG CGCCGATGTG
CGGCACACTT CGATGCAAGA GATCGAATCG GCGCTGCAGT AA
 
Protein sequence
MTEKHLSSQF DSELNGVSSR VMELGGMVEA QIHQAVYALL QFDPDAADRV METETRVNAM 
EIEIDRELSS IIARRQPTAR DLRLLIAISK TTANLERVGD EANKIARMVK SIIESGSARA
LPSNELRIAA DLASGLLRTA LDAFARLDTA AALSILKDDD LIDKEFDGFV RKLVTYMMED
PRTISASLDL LFLAKAIERI GDHAKNIAEF IIYIVKGADV RHTSMQEIES ALQ