| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2315 |
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| Symbol | |
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| ID | 7971172 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 2474679 |
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| End bp | 2475380 |
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| Gene Length | 702 bp |
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| Protein Length | 233 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644792897 |
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| Product | phosphate uptake regulator, PhoU |
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| Protein accession | YP_002944208 |
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| Protein GI | 239815298 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0704] Phosphate uptake regulator |
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| TIGRFAM ID | [TIGR02135] phosphate transport system regulatory protein PhoU |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.23954 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGAAA AACATCTCTC CAGCCAGTTC GACAGCGAAC TCAACGGCGT GTCGTCGCGC
GTGATGGAGC TCGGCGGCAT GGTCGAGGCG CAGATCCACC AGGCGGTGTA TGCGCTCTTG
CAGTTCGATC CTGACGCTGC CGACCGCGTG ATGGAAACCG AGACGCGCGT CAATGCGATG
GAGATCGAGA TCGACCGCGA GCTGTCGTCG ATCATCGCGC GGCGCCAGCC GACGGCGCGC
GACCTGCGCC TCTTGATCGC CATCTCCAAG ACCACGGCCA ACCTGGAGCG CGTGGGCGAC
GAGGCCAACA AGATCGCGCG CATGGTCAAG TCGATCATCG AGAGCGGCTC GGCCCGCGCG
CTGCCCTCGA ACGAGCTGCG CATCGCGGCC GACCTGGCCT CGGGCCTGCT GCGTACCGCG
CTGGACGCCT TCGCGCGGCT GGACACGGCC GCGGCGCTGT CGATCCTGAA GGACGACGAC
CTGATCGACA AGGAGTTCGA CGGCTTCGTG CGCAAGCTGG TCACCTACAT GATGGAAGAC
CCGCGCACGA TCTCGGCCAG CCTCGACCTG CTGTTCCTGG CCAAGGCCAT CGAACGCATC
GGCGACCACG CCAAGAACAT CGCCGAGTTC ATCATCTACA TCGTCAAGGG CGCCGATGTG
CGGCACACTT CGATGCAAGA GATCGAATCG GCGCTGCAGT AA
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| Protein sequence | MTEKHLSSQF DSELNGVSSR VMELGGMVEA QIHQAVYALL QFDPDAADRV METETRVNAM
EIEIDRELSS IIARRQPTAR DLRLLIAISK TTANLERVGD EANKIARMVK SIIESGSARA
LPSNELRIAA DLASGLLRTA LDAFARLDTA AALSILKDDD LIDKEFDGFV RKLVTYMMED
PRTISASLDL LFLAKAIERI GDHAKNIAEF IIYIVKGADV RHTSMQEIES ALQ
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