| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2312 |
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| Symbol | |
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| ID | 7971169 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 2471902 |
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| End bp | 2472981 |
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| Gene Length | 1080 bp |
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| Protein Length | 359 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644792894 |
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| Product | phosphate ABC transporter, inner membrane subunit PstC |
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| Protein accession | YP_002944205 |
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| Protein GI | 239815295 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0573] ABC-type phosphate transport system, permease component |
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| TIGRFAM ID | [TIGR02138] phosphate ABC transporter, permease protein PstC |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.310759 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAGCA CTTCGCTCGA GGATGCGCCG CTTTCGTCAT TGCCGGAGCG ACCCGTGTCA
TCCACCTATC CTGCCTCCGC ATCCACGCTC GACCTCGCGG CCGAACGCGG CCGCGCCACC
GCACCACCGC CCGCCAAGGC ACCGCGTTCA GGCCCGATGG CCGACCGCCT GTTCGGCTGG
GCCGCCAAGG GCGCCGCGCT GCTCACGCTC GCGATGCTGA TCGGCATCCT GCTGTCGCTG
ATTGCCGGCG CATGGCCCGC CATCTCGAAG TACGGCCTCG GCTTTCTGAC CAGCAGCGTC
TGGGACCCGG TGCAGAACGA ATACGGCGGC CTGGTCATGA TCTACGGCAC GCTGGCCACC
TCGGTCATCG CGCTGGTGAT CGCGGTGCCG GTGAGCTTCG GCATTGCGCT GTTCCTGACC
GAGCTCTCGC CCAGCTGGCT CAAGCGTCCG CTGGGCACGG CCATCGAACT GCTCGCCGCC
GTGCCGTCGA TCGTGTACGG CATGTGGGGC CTGCTGGTGT TCGGGCCGAT CCTTTCCACC
TGGGTGCAGC AGCCGCTGCA GAAGCTGCTT GCCGGCGTGC CGTACCTCGG CGCGCTGGTG
TCCGGCCCGC CCGTGGGCAT CGGCATTCTC TCGGCCGGCA TCATCCTCGC GATCATGATC
ATTCCGTTCA TCGCCTCGGT GATGCGCGAC GTGTTCGAAG TGACGCCGCC GCTGCTCAAG
GAGTCGGCCT ACGGCCTGGG CTCCACCACC TGGGAAGTGG TGTCGAAGGT CGTGCTGCCC
TACACCAAGG CCGGCGTGAT CGGCGGCATC ATGCTCGGCC TGGGCCGCGC GCTGGGCGAG
ACGATGGCGG TCACCTTCGT GATCGGCAAC ATGAACCAGC TCAACTCGCT TTCCGTGTTC
GAGGCGGCCA ACAGCATCAC CTCGGCACTG GCCAATGAAT TCGCCGAAGC CGGCGCGGGC
CTGCACCAGG CCGCGCTGAT GTACCTCGGC CTGGTGCTGT TCTTCATCAC CTTCGTCGTG
CTGACGCTGT CGAAGGTGCT GCTGGCCCAG ATGAAGAAGA GCGAAGGGAC CAAGGCATGA
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| Protein sequence | MSSTSLEDAP LSSLPERPVS STYPASASTL DLAAERGRAT APPPAKAPRS GPMADRLFGW
AAKGAALLTL AMLIGILLSL IAGAWPAISK YGLGFLTSSV WDPVQNEYGG LVMIYGTLAT
SVIALVIAVP VSFGIALFLT ELSPSWLKRP LGTAIELLAA VPSIVYGMWG LLVFGPILST
WVQQPLQKLL AGVPYLGALV SGPPVGIGIL SAGIILAIMI IPFIASVMRD VFEVTPPLLK
ESAYGLGSTT WEVVSKVVLP YTKAGVIGGI MLGLGRALGE TMAVTFVIGN MNQLNSLSVF
EAANSITSAL ANEFAEAGAG LHQAALMYLG LVLFFITFVV LTLSKVLLAQ MKKSEGTKA
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