Gene Vapar_2306 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_2306 
Symbol 
ID7971163 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp2464275 
End bp2466593 
Gene Length2319 bp 
Protein Length772 aa 
Translation table11 
GC content68% 
IMG OID644792888 
Productpolyphosphate kinase 
Protein accessionYP_002944199 
Protein GI239815289 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0855] Polyphosphate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.314551 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCCGG CGGCCGCCCG GCCCGATGCC GGGCCGTCTG CCTCTTCGCC CGGCACGGGG 
CTGCCCAAGG GGGGGCCGCA GGCGTCACAC GGCGGTCACG AAAACGTCAC AAACGAGGGC
GACACTGTCA TATTTCAGCC TACATGTGCT CCCGTGCCGC TTGCCCCAGA ATCAGTGCCC
ATGCAACCTG CTCCCGCTGA CCGCACGCCC GCGGTCGCGG CAACGGCCCT CACGCTGCTC
GACCGCGATC ACAGCATCCT GTCGTTCAAC GAGCGCGTGC TCGACTGGGC CCGCAGGCCT
GAAGTGCCGC TGGTCGAGCG CCTTCGCTAC CTCTGCATCG TTTCATCGAA CCTCGATGAA
TTCTTCGAGG TGCGCGCCGC GCCGCACCTG ATTGCCAGCA GCGCCGGCGA CCAGAAGGGC
GCCTACACGA TCGAATCGTT CGAGCGCCTG GCCGAGGCCG CCCATGCGCT GGTGGCGCGC
CAGTACGCGC TCTACAACGA CGATCTGATG CCGACCTTCG CCAAGCACGG CATCCACATC
ATTTCGCACG GCGAACGCAA TCCGGCGCAG CGCAAATGGG TCAGCGAATA TTTCGAGCGC
GAAGTGCGCC CGCTGCTGAT TCCAGTGGGG CTGGACCCGG CGCACCCGTT TCCGCAGGTG
GCCAACAAGT CCCTCAACTT CATCGTGCGG CTCGGCGGCA AGGACGCCTT CGGGCGCGAG
AACCCGATCC AGATCGTGAA GGTGCCGCGC GTGCTGCCGC GCGTGATCCG CATGCCGGCC
AAGGTGTCGG ACGGCAAGAC GCTGTTCGTG GCGCTGTCGA GCGTGGTGCG CGCCCATCTA
TCGAGCATGT TCCCGGGGCG CGACGTCGGC GATTTCTCGC AGTTCCGCGT CACGCGGCAT
TCCGACCTGG CGGTCGACGA GGAAGACGTC AAGAACCTGC GCACCGCATT GCGCCAGGGG
CTGCAGCACC GGCACTACGG GCAGGCCGTA CGGCTCGAGG TGTCGGCCAG CTGCGCGGAG
TCGCTCGCGA GCTTCCTGCT GGCGCAATTC AACCTGCCGC AGCAGGCGCT CTACCGCGTG
CACGGCCCCG TCAACCTGGC CCGGCTGACC CAGCTGATCG ACCTGCTGGA GGAGCCGCAG
CTGCTGTTTC CGCCGTACTC GGCCTCCTAC CCGGTCACGC TGTCGCCGGC GCAGTCGTTC
TTCGAGCGGC TGCAGCACGG CGACGTGCTG ATCCACCAGC CCTTCGAGAG CTTCGACGGC
GTGCTCGCGT TCCTGCGCGA GGCCGTGCTG GACCCGCAGG TGCTGGCCAT CAAGCAGACC
ATCTACCGCA CGGGCACCGA TTCCGAGCTG ATGGACCTGC TGCGCGAGGC CGTGCGCCGC
GGCAAGGAAG TGACGGTGGT GGTGGAGCTC AAGGCCCGCT TCGACGAAGA GGCCAACATC
AACTGGGCCG AAATGCTCGA GTCGATCGGC GCGCAGGTGG TGTATGGCGT GGTGGGCCTG
AAGACGCACG CCAAGATGCT GCTGGTGACG CGCCGCGAGG GCAAGCAGAT GCGCCGCTAC
GGCCATCTTT CCACCGGCAA CTACAACCCG CGCACCGCCA GGCTCTACAC CGACATCAGC
CACCTGACGG CCGATCCGCT GCTCACGGCC GACATGGAAG CCGTGTTCGT GCACCTGGCA
AGCCAGAGCC GGCTGCCCAA GCTCAACCGC ATGTGGCTCG CGCCGTTCGA CCTGCACAAG
AACCTCATTG CGCAGATCGA CGCGCTCAGC CTGGCCGCGG CCACCGGCGA GCCGACCCGC
ATCGTCGCCA AGATGAATGC GCTGACCGAC GACGCCCTGG TGGCCGCGCT GATGCGCGCC
GGCCAGAACG GCGTGAAGAT CGACCTCATC GTGCGCGGCG CCTGCACGCT GCCCGCGCAG
GTGCCGGGCC TGACCGACAA CATCCGCGTG CGTTCGGTGA TCGGGCGTTT TCTCGAGCAC
TCGCGCGTTT TCTACTTCCG CAATGGCGAG GACGAGTCGC TCTACCTGTC GAGCGCCGAC
TGGATGAACC GCAACATGAT GCGGCGCATC GAGCTGGCCT GGCCGGTGAC CGACCCCGGC
CTGCGCCAGC GCCTGATCGA CGAATGCCTG GTTGCCTACC TGCACGACGG CCGCGACGCC
TGGGACCTGG GCGGCGACGG CATCTACACG CGCGTCGACC ACGACACCCA CGCCGGCGAG
GCGGGCGCGT CGCGCGCCAT CGAGGCGCAC GGCGCACAGG CGGCACTCAT GAACCGGTAT
GCATCGCGAG GCCATCACGC CGATGCACCC AGCAACTGA
 
Protein sequence
MKPAAARPDA GPSASSPGTG LPKGGPQASH GGHENVTNEG DTVIFQPTCA PVPLAPESVP 
MQPAPADRTP AVAATALTLL DRDHSILSFN ERVLDWARRP EVPLVERLRY LCIVSSNLDE
FFEVRAAPHL IASSAGDQKG AYTIESFERL AEAAHALVAR QYALYNDDLM PTFAKHGIHI
ISHGERNPAQ RKWVSEYFER EVRPLLIPVG LDPAHPFPQV ANKSLNFIVR LGGKDAFGRE
NPIQIVKVPR VLPRVIRMPA KVSDGKTLFV ALSSVVRAHL SSMFPGRDVG DFSQFRVTRH
SDLAVDEEDV KNLRTALRQG LQHRHYGQAV RLEVSASCAE SLASFLLAQF NLPQQALYRV
HGPVNLARLT QLIDLLEEPQ LLFPPYSASY PVTLSPAQSF FERLQHGDVL IHQPFESFDG
VLAFLREAVL DPQVLAIKQT IYRTGTDSEL MDLLREAVRR GKEVTVVVEL KARFDEEANI
NWAEMLESIG AQVVYGVVGL KTHAKMLLVT RREGKQMRRY GHLSTGNYNP RTARLYTDIS
HLTADPLLTA DMEAVFVHLA SQSRLPKLNR MWLAPFDLHK NLIAQIDALS LAAATGEPTR
IVAKMNALTD DALVAALMRA GQNGVKIDLI VRGACTLPAQ VPGLTDNIRV RSVIGRFLEH
SRVFYFRNGE DESLYLSSAD WMNRNMMRRI ELAWPVTDPG LRQRLIDECL VAYLHDGRDA
WDLGGDGIYT RVDHDTHAGE AGASRAIEAH GAQAALMNRY ASRGHHADAP SN