Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_2306 |
Symbol | |
ID | 7971163 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 2464275 |
End bp | 2466593 |
Gene Length | 2319 bp |
Protein Length | 772 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644792888 |
Product | polyphosphate kinase |
Protein accession | YP_002944199 |
Protein GI | 239815289 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0855] Polyphosphate kinase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.314551 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAGCCGG CGGCCGCCCG GCCCGATGCC GGGCCGTCTG CCTCTTCGCC CGGCACGGGG CTGCCCAAGG GGGGGCCGCA GGCGTCACAC GGCGGTCACG AAAACGTCAC AAACGAGGGC GACACTGTCA TATTTCAGCC TACATGTGCT CCCGTGCCGC TTGCCCCAGA ATCAGTGCCC ATGCAACCTG CTCCCGCTGA CCGCACGCCC GCGGTCGCGG CAACGGCCCT CACGCTGCTC GACCGCGATC ACAGCATCCT GTCGTTCAAC GAGCGCGTGC TCGACTGGGC CCGCAGGCCT GAAGTGCCGC TGGTCGAGCG CCTTCGCTAC CTCTGCATCG TTTCATCGAA CCTCGATGAA TTCTTCGAGG TGCGCGCCGC GCCGCACCTG ATTGCCAGCA GCGCCGGCGA CCAGAAGGGC GCCTACACGA TCGAATCGTT CGAGCGCCTG GCCGAGGCCG CCCATGCGCT GGTGGCGCGC CAGTACGCGC TCTACAACGA CGATCTGATG CCGACCTTCG CCAAGCACGG CATCCACATC ATTTCGCACG GCGAACGCAA TCCGGCGCAG CGCAAATGGG TCAGCGAATA TTTCGAGCGC GAAGTGCGCC CGCTGCTGAT TCCAGTGGGG CTGGACCCGG CGCACCCGTT TCCGCAGGTG GCCAACAAGT CCCTCAACTT CATCGTGCGG CTCGGCGGCA AGGACGCCTT CGGGCGCGAG AACCCGATCC AGATCGTGAA GGTGCCGCGC GTGCTGCCGC GCGTGATCCG CATGCCGGCC AAGGTGTCGG ACGGCAAGAC GCTGTTCGTG GCGCTGTCGA GCGTGGTGCG CGCCCATCTA TCGAGCATGT TCCCGGGGCG CGACGTCGGC GATTTCTCGC AGTTCCGCGT CACGCGGCAT TCCGACCTGG CGGTCGACGA GGAAGACGTC AAGAACCTGC GCACCGCATT GCGCCAGGGG CTGCAGCACC GGCACTACGG GCAGGCCGTA CGGCTCGAGG TGTCGGCCAG CTGCGCGGAG TCGCTCGCGA GCTTCCTGCT GGCGCAATTC AACCTGCCGC AGCAGGCGCT CTACCGCGTG CACGGCCCCG TCAACCTGGC CCGGCTGACC CAGCTGATCG ACCTGCTGGA GGAGCCGCAG CTGCTGTTTC CGCCGTACTC GGCCTCCTAC CCGGTCACGC TGTCGCCGGC GCAGTCGTTC TTCGAGCGGC TGCAGCACGG CGACGTGCTG ATCCACCAGC CCTTCGAGAG CTTCGACGGC GTGCTCGCGT TCCTGCGCGA GGCCGTGCTG GACCCGCAGG TGCTGGCCAT CAAGCAGACC ATCTACCGCA CGGGCACCGA TTCCGAGCTG ATGGACCTGC TGCGCGAGGC CGTGCGCCGC GGCAAGGAAG TGACGGTGGT GGTGGAGCTC AAGGCCCGCT TCGACGAAGA GGCCAACATC AACTGGGCCG AAATGCTCGA GTCGATCGGC GCGCAGGTGG TGTATGGCGT GGTGGGCCTG AAGACGCACG CCAAGATGCT GCTGGTGACG CGCCGCGAGG GCAAGCAGAT GCGCCGCTAC GGCCATCTTT CCACCGGCAA CTACAACCCG CGCACCGCCA GGCTCTACAC CGACATCAGC CACCTGACGG CCGATCCGCT GCTCACGGCC GACATGGAAG CCGTGTTCGT GCACCTGGCA AGCCAGAGCC GGCTGCCCAA GCTCAACCGC ATGTGGCTCG CGCCGTTCGA CCTGCACAAG AACCTCATTG CGCAGATCGA CGCGCTCAGC CTGGCCGCGG CCACCGGCGA GCCGACCCGC ATCGTCGCCA AGATGAATGC GCTGACCGAC GACGCCCTGG TGGCCGCGCT GATGCGCGCC GGCCAGAACG GCGTGAAGAT CGACCTCATC GTGCGCGGCG CCTGCACGCT GCCCGCGCAG GTGCCGGGCC TGACCGACAA CATCCGCGTG CGTTCGGTGA TCGGGCGTTT TCTCGAGCAC TCGCGCGTTT TCTACTTCCG CAATGGCGAG GACGAGTCGC TCTACCTGTC GAGCGCCGAC TGGATGAACC GCAACATGAT GCGGCGCATC GAGCTGGCCT GGCCGGTGAC CGACCCCGGC CTGCGCCAGC GCCTGATCGA CGAATGCCTG GTTGCCTACC TGCACGACGG CCGCGACGCC TGGGACCTGG GCGGCGACGG CATCTACACG CGCGTCGACC ACGACACCCA CGCCGGCGAG GCGGGCGCGT CGCGCGCCAT CGAGGCGCAC GGCGCACAGG CGGCACTCAT GAACCGGTAT GCATCGCGAG GCCATCACGC CGATGCACCC AGCAACTGA
|
Protein sequence | MKPAAARPDA GPSASSPGTG LPKGGPQASH GGHENVTNEG DTVIFQPTCA PVPLAPESVP MQPAPADRTP AVAATALTLL DRDHSILSFN ERVLDWARRP EVPLVERLRY LCIVSSNLDE FFEVRAAPHL IASSAGDQKG AYTIESFERL AEAAHALVAR QYALYNDDLM PTFAKHGIHI ISHGERNPAQ RKWVSEYFER EVRPLLIPVG LDPAHPFPQV ANKSLNFIVR LGGKDAFGRE NPIQIVKVPR VLPRVIRMPA KVSDGKTLFV ALSSVVRAHL SSMFPGRDVG DFSQFRVTRH SDLAVDEEDV KNLRTALRQG LQHRHYGQAV RLEVSASCAE SLASFLLAQF NLPQQALYRV HGPVNLARLT QLIDLLEEPQ LLFPPYSASY PVTLSPAQSF FERLQHGDVL IHQPFESFDG VLAFLREAVL DPQVLAIKQT IYRTGTDSEL MDLLREAVRR GKEVTVVVEL KARFDEEANI NWAEMLESIG AQVVYGVVGL KTHAKMLLVT RREGKQMRRY GHLSTGNYNP RTARLYTDIS HLTADPLLTA DMEAVFVHLA SQSRLPKLNR MWLAPFDLHK NLIAQIDALS LAAATGEPTR IVAKMNALTD DALVAALMRA GQNGVKIDLI VRGACTLPAQ VPGLTDNIRV RSVIGRFLEH SRVFYFRNGE DESLYLSSAD WMNRNMMRRI ELAWPVTDPG LRQRLIDECL VAYLHDGRDA WDLGGDGIYT RVDHDTHAGE AGASRAIEAH GAQAALMNRY ASRGHHADAP SN
|
| |