| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2305 |
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| Symbol | |
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| ID | 7971162 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 2463418 |
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| End bp | 2464278 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644792887 |
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| Product | hypothetical protein |
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| Protein accession | YP_002944198 |
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| Protein GI | 239815288 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3176] Putative hemolysin |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.050145 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGAAC TGCCCAACCC GACGTTCCCG CTGTCGCAGC TCGGCCTGCG CGCCGCCCTG
TGGCCCGTCC CTGCGGCCAC GCCCGCATCG GTGCCCGCTG CCGTGCTCGC GCCGCCGGCC
ATCGTCGATG CCAGGCAAGG CATCACCGTG AGCTGGGCCC GCCACCTGGA CGACGTGCGC
GCCGCGCAGC GCCTGCGCCA CGAGGTGTTC GTCGGCGAAA TGGGCGCCCG CGTGAGCACG
CCGCTGGCCG GCCACGACAT CGACCTGTTC GACGACTTCT GCGAGCACCT GCTGGTGCGC
GAGGAACAGA CCCAGCAGGT GATCGGCACC TACCGCGTGC TCACGCCGGC CCAGGCCCGG
CGCGTGGGCA GCACCTACAG CGACACCGAA TTCGACCTGA CCCGGCTGCG CGACCTGCGC
GAGCGCATGG TCGAGCTGGG CCGCAGCTGC GTGCATCCCG AGCACCGGCA GGGCGGCGTG
ATCCTTGCGC TGTGGGGGGC TCTTGCGGGC TTCATGCACC GCAACAAGCT CGACACCATG
ATCGGCTGCG CGAGCATTCC GATGTCGCAC AACGGCGTGA CCAGCGGCGA TGCGGCGGCC
AGCATCTGGC GGCAGCTGTC GGCCAGCCAC ATGGCGCCGA TCCAGTACCA GGTGCAGCCG
CGCCTGCCGC TGCCGGTGGA GCGGCTCGAC GGCGCGCTCG ACGTCGAGCC GCCCGCGCTC
ATCAAGGGCT ACCTGCGCCT GGGTGCCAAG GTGCTGGGCG CGCCGGCCTG GGACCCGGAC
TTCAACACGG CGGACCTGCC GATGCTGATG CGCATCGACG ACCTGCCGCC GCGCTACCGC
AAGCACTTTC TGGGCGCATG A
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| Protein sequence | MKELPNPTFP LSQLGLRAAL WPVPAATPAS VPAAVLAPPA IVDARQGITV SWARHLDDVR
AAQRLRHEVF VGEMGARVST PLAGHDIDLF DDFCEHLLVR EEQTQQVIGT YRVLTPAQAR
RVGSTYSDTE FDLTRLRDLR ERMVELGRSC VHPEHRQGGV ILALWGALAG FMHRNKLDTM
IGCASIPMSH NGVTSGDAAA SIWRQLSASH MAPIQYQVQP RLPLPVERLD GALDVEPPAL
IKGYLRLGAK VLGAPAWDPD FNTADLPMLM RIDDLPPRYR KHFLGA
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