| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2301 |
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| Symbol | |
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| ID | 7971156 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 2458758 |
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| End bp | 2459969 |
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| Gene Length | 1212 bp |
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| Protein Length | 403 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644792882 |
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| Product | integrase family protein |
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| Protein accession | YP_002944195 |
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| Protein GI | 239815285 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0582] Integrase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0308484 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGACAG ACACTTTCGT GAGGCAAGTG AAGCACAAGG GCAGTGAGAT CGGCGAGCGC
TACGCGGATG GTGGCGGCAT GTATCTGCGC GTCAAGGCCG CTGGCAAGTA CTGGCGCATG
GACTACCGGT TCAACGGCAA GGCGAAGACG CTGGCTTTGG GCGTCTACCC CGCGGTCTCG
CTCGCGAAGG CACGGCAGCG GCGCGACAAG GCCCGCGAGC TGCTTGCCGA CAACGTCGAT
CCCGGCCTCG CGAAGCGCGC GGAGAAACTG TCCCGGGCGG TGGAAGCGGC GAACACCTTC
GAGGCGTTGG CGCGGGAATT CCACGCCACC AAGGCCAGCA GTTGGAGTGC GTCCTATTCG
GAGCGCTGGA TGCGCATCAT GGACAAGGAC CTGTTCCCCT ACATCGGCAA GCTGCCGATC
GCCACGATCC AGGCCAAGGA TCTTCTGCAC GCGCTCAAGC GCGCCGAAAG CCGAGGCGTC
ATCGAGACGG CCCACACCTT GCGCCAGTGC GCCGGACAGG TGTTCCGCTA CGGTGTGCAG
ACAGGCCGTT GCGCGAGCAA TCCGGCGCCC GACCTACACG GGGCGCTCCG ACCGGTGATC
ACCAAGAGCA TGGCCGCCGT TCTGGAGCCG CAGAAGGTCG GAGAACTGAT GCGCGCCATC
TACGGCTACA GCGGACAGCC GATCACCCGC GCCGCCCTCC TCCTGTCCGC CCTGCTCTTC
CAGCGCCCCG GCAACATCCG TGCGATGGAA TGGGCCTGGA TCGACCTCGA CAAGGCGATG
CTGACCATCC CGGCGCAGGA CATGAAGCGC AGGCTCCATG AAAAGCGCAA CGGCCGTCCC
CACTTCGTGC CGCTGGCGAA GCAGGCACTG CAGACACTGG AGGAAATTGC GCCATTGACC
GGCCATGGCC GATACGTGTT CCCCAGCATC CGCACGGGAG AGCGCCCCAT GAGCGAAAAC
ACCGTGAACG CGGCGTTGCG AAGGCTGGGA TACACCAACG ACGAGATGAC CGCCCATGGC
TTTCGGGCAA TGGCCCGCAC GGTCATGGCG GAGCAATTGC ACGGCATTTC GCCCGACGTC
ATCGAGGCAC AGCTTGCCCA TGGCAAGAGC GGGCCGCTGG GTGCGGCCTA CGACCGCGCG
GAGTTCATGG ACAAGCGCAA GGACATGATG CAGCGCTGGG CAGACTATCT GTATCAGGTT
GCTATGCGGT AA
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| Protein sequence | MLTDTFVRQV KHKGSEIGER YADGGGMYLR VKAAGKYWRM DYRFNGKAKT LALGVYPAVS
LAKARQRRDK ARELLADNVD PGLAKRAEKL SRAVEAANTF EALAREFHAT KASSWSASYS
ERWMRIMDKD LFPYIGKLPI ATIQAKDLLH ALKRAESRGV IETAHTLRQC AGQVFRYGVQ
TGRCASNPAP DLHGALRPVI TKSMAAVLEP QKVGELMRAI YGYSGQPITR AALLLSALLF
QRPGNIRAME WAWIDLDKAM LTIPAQDMKR RLHEKRNGRP HFVPLAKQAL QTLEEIAPLT
GHGRYVFPSI RTGERPMSEN TVNAALRRLG YTNDEMTAHG FRAMARTVMA EQLHGISPDV
IEAQLAHGKS GPLGAAYDRA EFMDKRKDMM QRWADYLYQV AMR
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