| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2296 |
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| Symbol | |
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| ID | 7971151 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 2455858 |
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| End bp | 2456781 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 644792877 |
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| Product | hypothetical protein |
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| Protein accession | YP_002944190 |
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| Protein GI | 239815280 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00770996 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCTGGGGC TGCCCGATCT GATCGCCGCA ATGGCTCGCC ACCACACTAT TCATTCAGCC
GCGATCGCAA ATCGCGTTTT GCAGACAATC CCTAGAGGTC CGGTTCTGAC GCCAACAAGA
GGCTTGCCAG CACGACAACT CACCGCCGGA GAAGTGGCGC GCGCAAACAG CTTCCAAATG
CAGGCTGGGC GCAGCACGGC TCAAGCGATC GAGCTGGGGG CGATGGCCTC GCCGCCAGGA
CTTGTAGCCA GGACGGGCGT GGCGGCCTTC GGTGCAACGA CCAACTTGCA GCAGGGCAAC
TATGGCGCTG CTGCGTGGAA TGCGGCCGAG ATCGGCATGA ACTTCGCTGG TGCGGGAGTG
CTGAGCAAGA TCGGCAAGCC CGCCGCGCTT GGCGACAGCC CTGAGACGGC ATTGAGTTCG
CTGCTGAGAA GTGGGACTGT TCCGGAGTCG CTGGGGCGCA CAACCATTGC GCCTACTGCA
CAGACTGCTA TTGGTGTGCT TGTGACTCGA TCGGCTAACC CTCTGAGTCC CGTGCGGGAG
TTCGATGCAT TCGGCAATGA GATCATTTAC CGGTCGATGT CGCGGCCGGA CTTCGAACAC
TTAGAAAACT TTGGCGTCTT ACGTCCAACT AAGGAAACCT TCATCTCGCC TGACTTCGGT
TATTCGTCGA AGTACACTGA CAACAAGAGC GTGACCGTGC GCTTTGCCAC CGAGCCGGGT
ACCTCGGCTG CATTGCAAGA GATAGGGATT GCTGCTGGTC CGCGGGCAGC GCAAGAACTG
GGTTTGGTGG AGCGTAGCGG CGATTGGATG CAAACCAACA CGCGTTTTAA GGTGGAAAAG
GGCGTGATGA ATACTGGACT TGGTCAAGGT CCAGGCATCA CAATCTTCAA CCGCGGCATC
GTTGACTTCG AGCGTGTGCG CTAA
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| Protein sequence | MLGLPDLIAA MARHHTIHSA AIANRVLQTI PRGPVLTPTR GLPARQLTAG EVARANSFQM
QAGRSTAQAI ELGAMASPPG LVARTGVAAF GATTNLQQGN YGAAAWNAAE IGMNFAGAGV
LSKIGKPAAL GDSPETALSS LLRSGTVPES LGRTTIAPTA QTAIGVLVTR SANPLSPVRE
FDAFGNEIIY RSMSRPDFEH LENFGVLRPT KETFISPDFG YSSKYTDNKS VTVRFATEPG
TSAALQEIGI AAGPRAAQEL GLVERSGDWM QTNTRFKVEK GVMNTGLGQG PGITIFNRGI
VDFERVR
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