| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2295 |
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| Symbol | |
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| ID | 7971150 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 2454808 |
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| End bp | 2455791 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644792876 |
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| Product | transposase IS4 family protein |
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| Protein accession | YP_002944189 |
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| Protein GI | 239815279 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3039] Transposase and inactivated derivatives, IS5 family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0556761 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTGCCA AACGCGTAGT GCCGCCGAGT CAACTCGGCC TGGGCCTGAA TCTGTCGACG
AAGAAGACGC GCAAGCGCGA GTTCCTCGAT GAGATGGATC GGGTGGTTCC GTGGGGCGCA
CTGGTGCAGA TCGTCCAGCC CCACAGCCCG CGGGCCAAGA CGGGGCGCCC GCCCTTTGCC
ATCGAGACGA TGCTGCGCAT TCACTATCTG CAGCAATGGT TCGGGCTGAG TGATCCGGCC
ATGGAAGAGG CGCTGCACGA CGTACCCCTG TACCGCGAGT TTGCGGGTCT GGGTGACGGC
GTGAGCCGTC TGCCCGACGA GACCACCATC CTGCGGTTTC GTCACCTGCT GGAAGCCCAT
GACCTGGCTG TCGACATGCT GCGCGTGGTC AACGACATCT TGCAGGCCAA GGGCCTGATG
TTGCGCACGG GAACGGCTGT GGACGCCACC TTGATCGCGG CGCCCAGCTC GACCAAGAAC
GCCGAAGGCG AACGTGATCC CGAGATGCAT CAGGTCAAGA AGGGCAACCA GTGGTACTTC
GGGATGAAGG CGCACATCGG TGTGGATGCC GCGTCGGGCT TGGTACACAC GGTAGTGGGG
ACAGCGGCGA ACGTCAGCGA CATCAACGTC GCTGGCGCGC TCTTGCATGG GCAGGAGCAC
GCGGCGTTCG GTGACTCGGG CTACCAGGGC GTACACAAGC GAGCGGAGGC TGCGGGTCCG
ACCTGGCACG TGGCGATGCG CCCGGGCAAG CGCAGGCTGC TGAATCCGTT CATCGAGCCT
GAGTTCATGG CTGAGCGAGT GGAGAAGATG AAGGCCAGCA TCCGAGCCAA GGTCGAGCAC
CCGTTCCGAG TGATCAAGCA GCAGTTCGGG TTCACGAAGG TTCGCTACCG AGGCTTGATG
AAGAACACGG CGCAGATCGT CACGCTGTTT GCGCTGTCGA ACCTGTGGAT GGCGCGCAAG
CGGTTGATAC AGGCCGGGGG ATGA
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| Protein sequence | MIAKRVVPPS QLGLGLNLST KKTRKREFLD EMDRVVPWGA LVQIVQPHSP RAKTGRPPFA
IETMLRIHYL QQWFGLSDPA MEEALHDVPL YREFAGLGDG VSRLPDETTI LRFRHLLEAH
DLAVDMLRVV NDILQAKGLM LRTGTAVDAT LIAAPSSTKN AEGERDPEMH QVKKGNQWYF
GMKAHIGVDA ASGLVHTVVG TAANVSDINV AGALLHGQEH AAFGDSGYQG VHKRAEAAGP
TWHVAMRPGK RRLLNPFIEP EFMAERVEKM KASIRAKVEH PFRVIKQQFG FTKVRYRGLM
KNTAQIVTLF ALSNLWMARK RLIQAGG
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