| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2277 |
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| Symbol | |
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| ID | 7971132 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 2420424 |
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| End bp | 2420825 |
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| Gene Length | 402 bp |
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| Protein Length | 133 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644792859 |
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| Product | flagellar hook capping protein |
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| Protein accession | YP_002944172 |
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| Protein GI | 239815262 |
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| COG category | [N] Cell motility |
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| COG ID | [COG1843] Flagellar hook capping protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.819928 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCCATCG ATGCAATTAG CGGTTCCACA GCAACCAACC TTCAGGCCAG CAGCCTGGGC
ATGGAGGATT TCCTCAAGAT CCTGCTCACG CAGCTCACCT ACCAGGATCC CCTGAAGCCC
ATGGACAACC AGGAGTTCAT GGCGCAGATG GCGCAGTTCA CGAGCCTGGA GCAGACGCAG
CAGCTCAACA ACAAGATCGA AACGCTGATC ACCAACCAGG CCGCGCTGCA GTCGGTGGGA
CTGATCGGCA AGACGGTCGA CGTCAACACG CCGACCGGCG CCGTCACCGG CACGGTGAGC
GCGCTTTCGC TGTCGGGCGA TGCGCCTCTC TTGACCGTTC GCACGGCCGC AGGCGCCGTG
CTGGCAAACA TCTCGCTGAG CCAGCTCGCG GCCGTGCGCT GA
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| Protein sequence | MAIDAISGST ATNLQASSLG MEDFLKILLT QLTYQDPLKP MDNQEFMAQM AQFTSLEQTQ
QLNNKIETLI TNQAALQSVG LIGKTVDVNT PTGAVTGTVS ALSLSGDAPL LTVRTAAGAV
LANISLSQLA AVR
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