Gene Vapar_2269 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_2269 
Symbol 
ID7969983 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand+ 
Start bp2413842 
End bp2414303 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content68% 
IMG OID644792851 
Productflagellar basal-body rod protein FlgC 
Protein accessionYP_002944164 
Protein GI239815254 
COG category[N] Cell motility 
COG ID[COG1558] Flagellar basal body rod protein 
TIGRFAM ID[TIGR01395] flagellar basal-body rod protein FlgC 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.722387 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACTACA CCCAATCCTT TGCCATCAGC GCCATCGGCA TGAACATCGA GCGCACCCGC 
GTCGATGTCG CCGCGCTCAA CCTGGCCAAT GCCAACACCG TGCAGGGCGT CGGCGGCACC 
AGCTATCAAC CGCTTCGCGT GATTGCCGAA GCCCGGTCGC CGGGCGGCGA GGGCGCTGCT 
GCGTTCGGCG CGCTCGTCAG CCAGGGGCTG GATGCGGCGG ATGCCGCGCA AGGCAGCCCG 
CTCGTGCGCG TCGTGCCAAC GAATGCGCCG CCGCGGCTCG TCTACGAACC CGGGCATCCG 
CTGGCCAACG AGAGCGGATA CGTTGCCTAC GCGGCAGTCG ATACGGCCAC CGAAATGGTC 
AGCATGATGA GCGCGACGCG CGCCTACGAG GCGAACGTTT CGGCCATGAA CACCGCGCGC 
ACTCTGGCGC TCAGGGCGCT GGACATCGGG AGCAATGCGT GA
 
Protein sequence
MDYTQSFAIS AIGMNIERTR VDVAALNLAN ANTVQGVGGT SYQPLRVIAE ARSPGGEGAA 
AFGALVSQGL DAADAAQGSP LVRVVPTNAP PRLVYEPGHP LANESGYVAY AAVDTATEMV 
SMMSATRAYE ANVSAMNTAR TLALRALDIG SNA