Gene Vapar_2240 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_2240 
Symbol 
ID7969954 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp2386480 
End bp2387472 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content66% 
IMG OID644792828 
Producthypothetical protein 
Protein accessionYP_002944141 
Protein GI239815231 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCCAACCC TCGCGACCGC CGTTCTGCGC TACCTCCATG AGGTCCTGGG CATTGAAGCG 
CCAGCCGTGA AGCCGTGGGC GCGTGCCAAC GAACTGCCGT ACTTCCTTCG CGATGCCTTC
CAGTTCGGCG AGCTCGAACT GCTGGGGCAG CCCCTTGTCC TGGCGATCGG GCGCGCGCAG
GCCAAGCAGT CCCTCAGCGA AGTCCGGACC TGGCTGAACA AGGTCCAGGC CATGGCCGGT
CAGCCGGCGG TCTACGTCAC CGATGCACTG GCCTCCTACG ACCGTCGACG CTTGATCGAG
CAAAAAGTCC CGTTCATCGT GCCGGGCAAC CAACTCTATC TGCCGGACCT GGGCCTGGAC
CTGCGCGAGT ATTTTCGGCA GCGCGCGCCG GCCACGGAAG CGTTGAGCCC TTCCGCGCAA
GCCATGCTGA TCACTGCCTT GCTGCGCCAG CCGTGGCAAT CCGATTGGCA GCCCTCCGAG
ATCGCAGTCG CCTTGGGCTA CACGCCCATG ACACAGTCAC GCGCGGTCAA GGAACTGACT
GCGGCCGGGC TGGCGACGGC ATACACGGTC GGCCGCTCGC GCTGGCTGCG AATGGAACTC
CCGCCGGAGC AGGTCTGGGA GCGTGCGAAG CCCGCACTGC GGACGCCGGT CAGGCGTACG
GTCTGGGTGG CCGCCCATGG CACCGTTGCA CGCCGGCCCG GCCGCCTCGC GGGTCTGAGC
GCGCTCGCGC GCTATTCCAT GCTGACCGAG CCGAAATGGC CGGTGTTTGC GTTGACCGCC
GCTGACTGGA AGGCTGCGAC GGATGCCGGC GTTCGCGAGT TGCCTGAGCC CGAAGCGGGC
GCCCAGGAAT GGCAGCTGTG GAGCTACAGC CCGGCATTGG TGCCAGACGC CAACACGGTG
GACCCGCTCT CGCTGACGCT CAGCCTGCAG AAGAACGCCG ACGACCGAAT CCAGCTCGCA
CTGGATGAAC TGAAAGGACA ACTTCCATGG TGA
 
Protein sequence
MPTLATAVLR YLHEVLGIEA PAVKPWARAN ELPYFLRDAF QFGELELLGQ PLVLAIGRAQ 
AKQSLSEVRT WLNKVQAMAG QPAVYVTDAL ASYDRRRLIE QKVPFIVPGN QLYLPDLGLD
LREYFRQRAP ATEALSPSAQ AMLITALLRQ PWQSDWQPSE IAVALGYTPM TQSRAVKELT
AAGLATAYTV GRSRWLRMEL PPEQVWERAK PALRTPVRRT VWVAAHGTVA RRPGRLAGLS
ALARYSMLTE PKWPVFALTA ADWKAATDAG VRELPEPEAG AQEWQLWSYS PALVPDANTV
DPLSLTLSLQ KNADDRIQLA LDELKGQLPW