Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_2240 |
Symbol | |
ID | 7969954 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 2386480 |
End bp | 2387472 |
Gene Length | 993 bp |
Protein Length | 330 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644792828 |
Product | hypothetical protein |
Protein accession | YP_002944141 |
Protein GI | 239815231 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCCAACCC TCGCGACCGC CGTTCTGCGC TACCTCCATG AGGTCCTGGG CATTGAAGCG CCAGCCGTGA AGCCGTGGGC GCGTGCCAAC GAACTGCCGT ACTTCCTTCG CGATGCCTTC CAGTTCGGCG AGCTCGAACT GCTGGGGCAG CCCCTTGTCC TGGCGATCGG GCGCGCGCAG GCCAAGCAGT CCCTCAGCGA AGTCCGGACC TGGCTGAACA AGGTCCAGGC CATGGCCGGT CAGCCGGCGG TCTACGTCAC CGATGCACTG GCCTCCTACG ACCGTCGACG CTTGATCGAG CAAAAAGTCC CGTTCATCGT GCCGGGCAAC CAACTCTATC TGCCGGACCT GGGCCTGGAC CTGCGCGAGT ATTTTCGGCA GCGCGCGCCG GCCACGGAAG CGTTGAGCCC TTCCGCGCAA GCCATGCTGA TCACTGCCTT GCTGCGCCAG CCGTGGCAAT CCGATTGGCA GCCCTCCGAG ATCGCAGTCG CCTTGGGCTA CACGCCCATG ACACAGTCAC GCGCGGTCAA GGAACTGACT GCGGCCGGGC TGGCGACGGC ATACACGGTC GGCCGCTCGC GCTGGCTGCG AATGGAACTC CCGCCGGAGC AGGTCTGGGA GCGTGCGAAG CCCGCACTGC GGACGCCGGT CAGGCGTACG GTCTGGGTGG CCGCCCATGG CACCGTTGCA CGCCGGCCCG GCCGCCTCGC GGGTCTGAGC GCGCTCGCGC GCTATTCCAT GCTGACCGAG CCGAAATGGC CGGTGTTTGC GTTGACCGCC GCTGACTGGA AGGCTGCGAC GGATGCCGGC GTTCGCGAGT TGCCTGAGCC CGAAGCGGGC GCCCAGGAAT GGCAGCTGTG GAGCTACAGC CCGGCATTGG TGCCAGACGC CAACACGGTG GACCCGCTCT CGCTGACGCT CAGCCTGCAG AAGAACGCCG ACGACCGAAT CCAGCTCGCA CTGGATGAAC TGAAAGGACA ACTTCCATGG TGA
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Protein sequence | MPTLATAVLR YLHEVLGIEA PAVKPWARAN ELPYFLRDAF QFGELELLGQ PLVLAIGRAQ AKQSLSEVRT WLNKVQAMAG QPAVYVTDAL ASYDRRRLIE QKVPFIVPGN QLYLPDLGLD LREYFRQRAP ATEALSPSAQ AMLITALLRQ PWQSDWQPSE IAVALGYTPM TQSRAVKELT AAGLATAYTV GRSRWLRMEL PPEQVWERAK PALRTPVRRT VWVAAHGTVA RRPGRLAGLS ALARYSMLTE PKWPVFALTA ADWKAATDAG VRELPEPEAG AQEWQLWSYS PALVPDANTV DPLSLTLSLQ KNADDRIQLA LDELKGQLPW
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