Gene Vapar_2236 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_2236 
Symbol 
ID7969950 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp2383231 
End bp2384376 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content70% 
IMG OID644792824 
Productalanine racemase domain protein 
Protein accessionYP_002944137 
Protein GI239815227 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3616] Predicted amino acid aldolase or racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTCCTG ATTCGCAAGT CAACCAACCG CTGATCGGAA TTGCCGGCGG CCGGCAGTCG 
CTCGACACGC CGGCGCTGCT GCTCGACCTT GGCGCGCTGA CGCGCAACAT CGAGCGCATG
GCCGCCTTTG CCAAGGCGCG CGGCGTCGGG CTGCGGCCGC ACGTGAAGAC GCACAAGTCG
GTGGAGATCG CGCGCCGCCA GGTGGCCGCG GGCGCCATCG GCGTGAGCTG CGTCACGCTG
GGTGAGGCCG AGGTCATGGT CAAGGCCGGC ATTCCGGACG TGCTGATCAC CTCCCCGGCC
GTCACGCCGA GCAAGATCGC GCGCGTGGTC AAGCTTGCCA GGCTGGCAGG CCCCGGCGGA
ATGATGGTGG TGGTGGACGA CCCGCGCAAT GCCGCGGACC TGGCCGCCGC CACGCTCGGC
CTGCCGCATC CGCTCGAGGT GCTGGTCGAC TACGGCGCCG GCTACAACCG CACGGGCGCG
GCCAGCGAAG CGCAGGTGCT CGAGCTTGCA CGCCGCATCG CAGCCGAGCC GCGCCTGAAG
CTGCGCGGGC TGCAGGCCTA TGCCGGCAAC CTGCAGCACA TCGTCGACCG CGAGCAGCGC
AGCGCCGCCG CGGCCAGCCT GCGCGAGACC ATCGCGCGCA TCGTCGCGGA GGCCGAGCGC
AACGGCATTC ACTTCGAGAT CGTCACGGGT GCGGGCACCG GCACGCACGA CCTCGATGCA
CAGCGCGACG CCTTCACCGA ACTGCAGGCC GGCTCCTATG TGTTCATGGA TGCGGAATAT
GCGCAGGTGC TGCAAGCCAG CCCCGGGCAG CCTTCACCCT TCGAGGTGTC GCTGTTCGTG
CAGACGGCGG TGGTGAGCAC CAATGCGGCG GAATGGGTCA CGGTGGACGG CGGCACCAAG
TGCTTTGCGA CCGACTGCGG CGTGCCGCTG GTGGCGCGCG GGGCCGATCC GGCGAGCCGC
TACGCCTTCT TCGGCGACGA GCACGGCAAG CTGTTTTGCG CCGGGCAGCG GCCCGCGCTC
GGCGACCGGG TGGAGTTCAT CACGCCGCAT TGCGACCCGA CCGTCAACCT GCACGACGCC
TACCACGTGG TCGACGGCGA CACGCTGGTC GCCATCTGGC CGGTGGACGC GCGCGGCAGG
CACTGA
 
Protein sequence
MLPDSQVNQP LIGIAGGRQS LDTPALLLDL GALTRNIERM AAFAKARGVG LRPHVKTHKS 
VEIARRQVAA GAIGVSCVTL GEAEVMVKAG IPDVLITSPA VTPSKIARVV KLARLAGPGG
MMVVVDDPRN AADLAAATLG LPHPLEVLVD YGAGYNRTGA ASEAQVLELA RRIAAEPRLK
LRGLQAYAGN LQHIVDREQR SAAAASLRET IARIVAEAER NGIHFEIVTG AGTGTHDLDA
QRDAFTELQA GSYVFMDAEY AQVLQASPGQ PSPFEVSLFV QTAVVSTNAA EWVTVDGGTK
CFATDCGVPL VARGADPASR YAFFGDEHGK LFCAGQRPAL GDRVEFITPH CDPTVNLHDA
YHVVDGDTLV AIWPVDARGR H