Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_2236 |
Symbol | |
ID | 7969950 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 2383231 |
End bp | 2384376 |
Gene Length | 1146 bp |
Protein Length | 381 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644792824 |
Product | alanine racemase domain protein |
Protein accession | YP_002944137 |
Protein GI | 239815227 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3616] Predicted amino acid aldolase or racemase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTTCCTG ATTCGCAAGT CAACCAACCG CTGATCGGAA TTGCCGGCGG CCGGCAGTCG CTCGACACGC CGGCGCTGCT GCTCGACCTT GGCGCGCTGA CGCGCAACAT CGAGCGCATG GCCGCCTTTG CCAAGGCGCG CGGCGTCGGG CTGCGGCCGC ACGTGAAGAC GCACAAGTCG GTGGAGATCG CGCGCCGCCA GGTGGCCGCG GGCGCCATCG GCGTGAGCTG CGTCACGCTG GGTGAGGCCG AGGTCATGGT CAAGGCCGGC ATTCCGGACG TGCTGATCAC CTCCCCGGCC GTCACGCCGA GCAAGATCGC GCGCGTGGTC AAGCTTGCCA GGCTGGCAGG CCCCGGCGGA ATGATGGTGG TGGTGGACGA CCCGCGCAAT GCCGCGGACC TGGCCGCCGC CACGCTCGGC CTGCCGCATC CGCTCGAGGT GCTGGTCGAC TACGGCGCCG GCTACAACCG CACGGGCGCG GCCAGCGAAG CGCAGGTGCT CGAGCTTGCA CGCCGCATCG CAGCCGAGCC GCGCCTGAAG CTGCGCGGGC TGCAGGCCTA TGCCGGCAAC CTGCAGCACA TCGTCGACCG CGAGCAGCGC AGCGCCGCCG CGGCCAGCCT GCGCGAGACC ATCGCGCGCA TCGTCGCGGA GGCCGAGCGC AACGGCATTC ACTTCGAGAT CGTCACGGGT GCGGGCACCG GCACGCACGA CCTCGATGCA CAGCGCGACG CCTTCACCGA ACTGCAGGCC GGCTCCTATG TGTTCATGGA TGCGGAATAT GCGCAGGTGC TGCAAGCCAG CCCCGGGCAG CCTTCACCCT TCGAGGTGTC GCTGTTCGTG CAGACGGCGG TGGTGAGCAC CAATGCGGCG GAATGGGTCA CGGTGGACGG CGGCACCAAG TGCTTTGCGA CCGACTGCGG CGTGCCGCTG GTGGCGCGCG GGGCCGATCC GGCGAGCCGC TACGCCTTCT TCGGCGACGA GCACGGCAAG CTGTTTTGCG CCGGGCAGCG GCCCGCGCTC GGCGACCGGG TGGAGTTCAT CACGCCGCAT TGCGACCCGA CCGTCAACCT GCACGACGCC TACCACGTGG TCGACGGCGA CACGCTGGTC GCCATCTGGC CGGTGGACGC GCGCGGCAGG CACTGA
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Protein sequence | MLPDSQVNQP LIGIAGGRQS LDTPALLLDL GALTRNIERM AAFAKARGVG LRPHVKTHKS VEIARRQVAA GAIGVSCVTL GEAEVMVKAG IPDVLITSPA VTPSKIARVV KLARLAGPGG MMVVVDDPRN AADLAAATLG LPHPLEVLVD YGAGYNRTGA ASEAQVLELA RRIAAEPRLK LRGLQAYAGN LQHIVDREQR SAAAASLRET IARIVAEAER NGIHFEIVTG AGTGTHDLDA QRDAFTELQA GSYVFMDAEY AQVLQASPGQ PSPFEVSLFV QTAVVSTNAA EWVTVDGGTK CFATDCGVPL VARGADPASR YAFFGDEHGK LFCAGQRPAL GDRVEFITPH CDPTVNLHDA YHVVDGDTLV AIWPVDARGR H
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