Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_2234 |
Symbol | |
ID | 7969948 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 2381804 |
End bp | 2382631 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644792822 |
Product | Enoyl-CoA hydratase/isomerase |
Protein accession | YP_002944135 |
Protein GI | 239815225 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCGAGC GAATCGAATG GACCCGCCAC CCCGACGGCG TGGTGCAACT GCTGCTTGCA CGCGCGGACA AGATGAACGC GCTCGATCCC GCGATGTTCG ACGCGCTGAT CGAAGCGGGC GAGGCCCTGC GCGGCGACGC CGCGGTGCGC GCGGTGGTCA TCTCGGGCCA GGGCAAGGCG TTTTGCGCGG GCCTGGACAT GGCCTCCTTC GAGCGCATGG GGCAGGGCGC CGCCAGCGCG GTGCTGGGTG CGGCCGCGGG CGGCACTGAC CTGTCCGCAC GCACGCACGG CATTTCGAAT GCAGCCCAGT ACGTGGCCAT GGCCTGGCGC GAGGTGCCGG TGCCCGTGAT TGCCGCGGTG CACGGTGTGG CTTTCGGCGG CGGCCTCCAG GTGGCGCTGG GGGCCGACAT CCGCATCGTG GCGCCCGACA CCAGGTTGTC GGTGATGGAA ATCAAGTGGG GCCTGGTGCC CGACATGGGC GGCATGGTGC TGATGCGCGA GCTTGCCCGC AGCGACATCG TGCGCGAGCT CACCTTCACG GGCCGCATCT TCTCGGGCGA GGAAGCACTG CAGCTCGGCT TTGCCACGCG GCTGGCGGCC GATCCGCTGG CAGAGGCGCT TCAGATGGCG CACGGCATCG CGGGCAAGAG CCCCGACGCC ATCCGAGCGG GCAAGCGCCT GCTCAATGCG GCACTGTCGC ACAGCGCGGC CGACCTGCTG ATCGCCGAAT CGGTGGAGCA GCAGGCCTTG ATCGGAAGCG CGAACCAGAA GGAGGCCGTG CAAGCCAACA TCGAACGGCG TCCGCCGCGG TTCGGCTCGT CGGCCTGA
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Protein sequence | MAERIEWTRH PDGVVQLLLA RADKMNALDP AMFDALIEAG EALRGDAAVR AVVISGQGKA FCAGLDMASF ERMGQGAASA VLGAAAGGTD LSARTHGISN AAQYVAMAWR EVPVPVIAAV HGVAFGGGLQ VALGADIRIV APDTRLSVME IKWGLVPDMG GMVLMRELAR SDIVRELTFT GRIFSGEEAL QLGFATRLAA DPLAEALQMA HGIAGKSPDA IRAGKRLLNA ALSHSAADLL IAESVEQQAL IGSANQKEAV QANIERRPPR FGSSA
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