Gene Vapar_2234 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_2234 
Symbol 
ID7969948 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp2381804 
End bp2382631 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content70% 
IMG OID644792822 
ProductEnoyl-CoA hydratase/isomerase 
Protein accessionYP_002944135 
Protein GI239815225 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCGAGC GAATCGAATG GACCCGCCAC CCCGACGGCG TGGTGCAACT GCTGCTTGCA 
CGCGCGGACA AGATGAACGC GCTCGATCCC GCGATGTTCG ACGCGCTGAT CGAAGCGGGC
GAGGCCCTGC GCGGCGACGC CGCGGTGCGC GCGGTGGTCA TCTCGGGCCA GGGCAAGGCG
TTTTGCGCGG GCCTGGACAT GGCCTCCTTC GAGCGCATGG GGCAGGGCGC CGCCAGCGCG
GTGCTGGGTG CGGCCGCGGG CGGCACTGAC CTGTCCGCAC GCACGCACGG CATTTCGAAT
GCAGCCCAGT ACGTGGCCAT GGCCTGGCGC GAGGTGCCGG TGCCCGTGAT TGCCGCGGTG
CACGGTGTGG CTTTCGGCGG CGGCCTCCAG GTGGCGCTGG GGGCCGACAT CCGCATCGTG
GCGCCCGACA CCAGGTTGTC GGTGATGGAA ATCAAGTGGG GCCTGGTGCC CGACATGGGC
GGCATGGTGC TGATGCGCGA GCTTGCCCGC AGCGACATCG TGCGCGAGCT CACCTTCACG
GGCCGCATCT TCTCGGGCGA GGAAGCACTG CAGCTCGGCT TTGCCACGCG GCTGGCGGCC
GATCCGCTGG CAGAGGCGCT TCAGATGGCG CACGGCATCG CGGGCAAGAG CCCCGACGCC
ATCCGAGCGG GCAAGCGCCT GCTCAATGCG GCACTGTCGC ACAGCGCGGC CGACCTGCTG
ATCGCCGAAT CGGTGGAGCA GCAGGCCTTG ATCGGAAGCG CGAACCAGAA GGAGGCCGTG
CAAGCCAACA TCGAACGGCG TCCGCCGCGG TTCGGCTCGT CGGCCTGA
 
Protein sequence
MAERIEWTRH PDGVVQLLLA RADKMNALDP AMFDALIEAG EALRGDAAVR AVVISGQGKA 
FCAGLDMASF ERMGQGAASA VLGAAAGGTD LSARTHGISN AAQYVAMAWR EVPVPVIAAV
HGVAFGGGLQ VALGADIRIV APDTRLSVME IKWGLVPDMG GMVLMRELAR SDIVRELTFT
GRIFSGEEAL QLGFATRLAA DPLAEALQMA HGIAGKSPDA IRAGKRLLNA ALSHSAADLL
IAESVEQQAL IGSANQKEAV QANIERRPPR FGSSA