| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2227 |
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| Symbol | |
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| ID | 7969941 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 2373601 |
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| End bp | 2374596 |
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| Gene Length | 996 bp |
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| Protein Length | 331 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644792815 |
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| Product | putative signal peptide protein |
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| Protein accession | YP_002944128 |
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| Protein GI | 239815218 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.094679 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCGCGA TTCTCCCTTG CCGGGGCGGC GGCCGTCTCT TGTGTATGGT GTGGTCCATG
AGCAGTCCGT TCCACTTGCC GGCTCCATGG TTGCGCGCAC TGGCGGGCGC CGTCCTGCTC
GCGTTTTCCG CGCATGCCCC GGCGGCGTCG CCCGACACCT CGCCCGCACC AGCCTCGGCC
TCGGCCTCGG CCTCGGCCGC GGCGCAGGCA CTGCGCGCCA CGCACCAGCG CATGGGTGCA
AAACTCGCGC AGAGCGGTTT CGGGCGGCCC ATCCAGCTCG ATTCGATGGA GACGCCGAAC
GGGCTGCAGG GCGACATCTA CGCGGTGGTG GATCACCCGC TGCCGGAGAT CAGCGCGGCG
CTCAAGGAGT CCGCCCGCTG GTGCGAGCTG CTCATGCTGC ATGTCAACAA CCGCCGCTGC
CGCACCGGCA CGTCGCCGCA GGGCGGCGAG ATGCTGACGC TGTTCGTGGT GCGGCGCTAC
GACAAGCCGG TCGAGCAGGC GTTCCAGCTG CCCTTTGCCT ATCGCGTGGC CAGCGCGACG
CCGGAGTACC TGTCGGTCGA GATGAACGCG GCCAACGGGC CGCTCGGAAC CAGCAACTAC
CGCGTCATGC TCGAGGCGGT GGCACTCGAC GGGCAGAAGA GCTTCCTGCA TTTCGGCTAC
AGCTACGACC ACAACATGAT GGTTCGCATG GCCACCGAGG CGTACCTGGC CACCTTCGGC
CGCAACAAGG TGGGCTTCAC GGTGGTGGGC AAGGAGGCCG ACGGGCAGCC CGACTACATC
CGCGGCACGC GCGGGCTGGT GGAGCGCAAT GCGATGCGCT ACTTCCTCAC GCTCGACTCC
TATCTCTCTT CGGGAGCCGG AGCACCGGCC GAGCGGCGGG AACGTTCCTG GTTCGCCGCG
GCCGAGCAGT ATCCGCGGCA GCTGCACGAG GTCGACCTGG ACACCTATCT CGCGATCAAG
CGCGAGGACC GGCAGCGCGA CGGCGCCGGC CGCTGA
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| Protein sequence | MAAILPCRGG GRLLCMVWSM SSPFHLPAPW LRALAGAVLL AFSAHAPAAS PDTSPAPASA
SASASAAAQA LRATHQRMGA KLAQSGFGRP IQLDSMETPN GLQGDIYAVV DHPLPEISAA
LKESARWCEL LMLHVNNRRC RTGTSPQGGE MLTLFVVRRY DKPVEQAFQL PFAYRVASAT
PEYLSVEMNA ANGPLGTSNY RVMLEAVALD GQKSFLHFGY SYDHNMMVRM ATEAYLATFG
RNKVGFTVVG KEADGQPDYI RGTRGLVERN AMRYFLTLDS YLSSGAGAPA ERRERSWFAA
AEQYPRQLHE VDLDTYLAIK REDRQRDGAG R
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