| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2225 |
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| Symbol | |
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| ID | 7969939 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 2370767 |
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| End bp | 2373154 |
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| Gene Length | 2388 bp |
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| Protein Length | 795 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644792813 |
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| Product | Radical SAM domain protein |
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| Protein accession | YP_002944126 |
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| Protein GI | 239815216 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1032] Fe-S oxidoreductase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.291322 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGCCC CCGTCGACGT CTCCTTTTTT GCGCGTGCCG CCAAGCCGCT GACCAGCTAC
CGCAAGTACT GGGCGGCCCG TTTCGGCACG GCCAAATTCC TGCCGACCAC GCGCAAGGAG
ATGGACGCGC TCGGCTGGGA CAGCTGCGAC ATCATCGTGG TGACGGGCGA CGCCTACGTC
GACCACCCGA GCTTCGGCAT GGCCGTGATC GGCCGCATGC TCGAGGCGCA GGGCTTCCGC
GTGGGCATCA TCGCCCAGCC CGACTGGCAG AGCGCCGAGC CCTTCAAGGC GCTGGGCAAG
CCGAACCTGT TCTTCGGCGT GACCGCCGGC AACATGGATT CGATGATCAA CCGCTACACG
GCGGACCGCA AGATCCGCAG CGACGACGCC TACACGCCCG GCGACGTCGG CGGCGCCAGG
CCCGACCGCG CGGCCATCGT GTATTCGCAG CGCTGCAAGG AAGCCTGGAA CGACGTGCCG
ATCATCCTCG GCGGCATCGA AGGGTCGCTG CGCCGCATCG CCCACTACGA CTACTGGCAG
GACAAGGTCC GCCGCTCGAT CGTGGTCGAC TCGAAGTGCG ACCTGCTCTT GTACGGCAAC
GCCGAGCGCG CCATCGTCGA GATCGCGCAC CGGCTGGCGG CCCGCGAGCC GGTGCACGAG
ATCACCGACG TGCGCGGCAC CGCCTTCGTG CGGCGCGACA CGCCCGCGGA CTGGTTCGAG
ATCAACTCCA CCAGCGTGGA CGAACCCGGC CGCGTCGAAG CCCACGTCAA TCCCTACCTG
ATGGTGTCCG AGCAGGCCAA GGCCAACGGC GCCACCTGCG CCAAGGAAGA CGAGGCCCAG
GCCGTGGCGC AGGCCGCGGA GGCAGGCGCC GCGGTGAACC CGGCCATCAA GCCGCTGACC
TTCGTGCCGA ACCCTGCGCT TGCGCCGCGC GCAAGGATCA AGGTGCCGCC GCGCGACCGC
AGCGTGATCC GGCTGCCGTC GTACGAGCAG GTGCGCGCCG ACCCGGTCCT CTACGCCCAC
GCCAACCGCG TGCTGCACCT GGAGACCAAC CCCGGCAACG CCCGCGCGCT GGTGCAGGCG
CACGGCGAGG GCGCCACCGC GCGCGACGTG TGGATCAACC CCCCGCCCAT TCCGCTCACC
ACGGCCGAGA TGGACCACGT GTTCGACCTG CCGTATGCGC GCAGCCCGCA TCCGCGCTAC
GCCGACGAGA ACGGCAGCCA TGACGGCGCC ACCAAGATCC CCGCGTGGGA AATGATCCGC
TTCAGCGTGA ACATCATGCG CGGCTGCTTC GGCGGCTGCA CCTTCTGCTC GATCACCGAG
CACGAGGGCC GCATCATCCA GAGCCGCTCG GAAGAATCGA TCATCAAGGA GGTCGAGGCC
ATCCGCGACA GCGTGAGCGG CTTCACCGGC ACCATCTCCG ACCTCGGCGG GCCCACGGCC
AACATGTACC GGCTCGGCTG CAAGAGCCCC GAGATCGAGG CCGCCTGCCG CAAGCCCAGC
TGCGTGTACC CGGGCATCTG CCCGAACCTG GGCACCAACC ACGATCCGCT CATCAAGATC
TACCGTCGCG CACGAGCGCT CAAGGGCATC AAGAAGATCC TCATCGGCTC CGGCCTGCGC
TACGACCTGG CCGTGCAGTC GCCCGAGTAC GTGAAGGAAC TGGTGCAGCA CCACGTCGGC
GGCTACCTGA AGATCGCGCC CGAGCACACC GAGCAGGGCC CGCTCACCAA GATGATGAAG
CCCGGCATCG GCAGCTACGA CAAGTTCAAG CAGATGTTCG AGAAGTTCTC GGCCGAGGCG
GGCAAGAAGC AGTACCTCAT TCCGTACTTC ATTGCCGCGC ATCCGGGCAC CAGCGACGAG
GACATGATGA ACCTCGCGAT CTGGCTCAAG AAGAACGGTT TCCGCGCCGA CCAGGTGCAA
ACGTTCTACC CGAGCCCGAT GGCCACGGCC ACCACGATGT ACCACACCAA CAAGAACCCG
CTGCGCAAGA TCACGCGCGA GAGCGAGACG GTGGACATCG TGCGCGGCGA CAAGCGCCGC
CGCCTGCACA AGGCCTTCCT GCGCTACCAC GACGCCAACA ACTGGCCGCT GCTGCGCGAG
GCCTTGAAGA GCATGGGCCG CGCCGACCTG ATCGGCAACG GCAAGCACCA CCTGATCCCG
ACGTGGCAGC CGCTGACCGA TGGCGGCTAC ACGAGCGCGC GGCGCAAGAA CTCGACCTCC
GCGCCGGTGG CCGCCAAGGC GCCGGTCAGG CTGGCGCCGG TGAAGCCCTC GAAGGGCCGC
ATCCTCACGC AGCACACCGG CCTGCCGCCG CGCGACAACG GTTCGGCGCC GGCGCCGCGC
AAGGCCTCGG CCGGCCCGGT GCGCGGCAAC ATCCGCAAGC CGCGCTGA
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| Protein sequence | MNAPVDVSFF ARAAKPLTSY RKYWAARFGT AKFLPTTRKE MDALGWDSCD IIVVTGDAYV
DHPSFGMAVI GRMLEAQGFR VGIIAQPDWQ SAEPFKALGK PNLFFGVTAG NMDSMINRYT
ADRKIRSDDA YTPGDVGGAR PDRAAIVYSQ RCKEAWNDVP IILGGIEGSL RRIAHYDYWQ
DKVRRSIVVD SKCDLLLYGN AERAIVEIAH RLAAREPVHE ITDVRGTAFV RRDTPADWFE
INSTSVDEPG RVEAHVNPYL MVSEQAKANG ATCAKEDEAQ AVAQAAEAGA AVNPAIKPLT
FVPNPALAPR ARIKVPPRDR SVIRLPSYEQ VRADPVLYAH ANRVLHLETN PGNARALVQA
HGEGATARDV WINPPPIPLT TAEMDHVFDL PYARSPHPRY ADENGSHDGA TKIPAWEMIR
FSVNIMRGCF GGCTFCSITE HEGRIIQSRS EESIIKEVEA IRDSVSGFTG TISDLGGPTA
NMYRLGCKSP EIEAACRKPS CVYPGICPNL GTNHDPLIKI YRRARALKGI KKILIGSGLR
YDLAVQSPEY VKELVQHHVG GYLKIAPEHT EQGPLTKMMK PGIGSYDKFK QMFEKFSAEA
GKKQYLIPYF IAAHPGTSDE DMMNLAIWLK KNGFRADQVQ TFYPSPMATA TTMYHTNKNP
LRKITRESET VDIVRGDKRR RLHKAFLRYH DANNWPLLRE ALKSMGRADL IGNGKHHLIP
TWQPLTDGGY TSARRKNSTS APVAAKAPVR LAPVKPSKGR ILTQHTGLPP RDNGSAPAPR
KASAGPVRGN IRKPR
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