| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2219 |
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| Symbol | |
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| ID | 7969933 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 2364440 |
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| End bp | 2365651 |
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| Gene Length | 1212 bp |
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| Protein Length | 403 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644792807 |
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| Product | Patatin |
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| Protein accession | YP_002944120 |
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| Protein GI | 239815210 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1752] Predicted esterase of the alpha-beta hydrolase superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGACGA AGACGACCAG GAAGCCACGT GCCGCAAGCC AAAAAACCCT CAACAACACC
TTCGAGGAGC GCCGCGAAGA CATGCGCGCC GCGCGCAAGG CGCTGGTGCT GCAGGGCGGC
GGCGCGCTCG GCGCCTACCA GGCCGGCGTG TATGCCGCGC TCAGCGAGAC CGACCTGCAG
CCGCACTGGA TTGCCGGCGT CTCCATTGGC GCCATCAATG CGGCGCTGAT CGCGGGCAAC
GCGCCCGAGA AGCGCGTCGA CCGGCTGCGC GAGTTCTGGC ACCTGGTGTC TTCGGGGCCG
GCGCAGCGCC TGCCGTCATG GCTGGGCGAC CGCGCCACGC AGAACCAGTG GAGCGCCAGC
ATGGCGATGC TGGTGGGCAT TCCGGGCTTC TTCGAGCCGC GCTATTCGCC CGCGCTGCTG
ATGGGCGCCG CGGCGCCGCT CCTGAGTTAC TACGACACCG CGCCGCTGAA GGCCACGCTC
GAGCGCCTGG TCGACTTCGA CCGCATCAAC GCCTGCGAGG CGCGCTTCAG CGTGGGTGCG
GTCGACGTGC GCACCGGCAA CTCGGTGTAC TTCGACAACA CGCGCCAGCG CATCGGCCCC
GAGCACATCA TGGCCAGCGG CGCGCTGCCG CCGGGCTTTG CACCGGTCTG CATCGACGGC
GACGACTACT GGGACGGCGG CATCGTCTCG AACACGCCGC TGCAGTACGT GCTCGACATC
CATCCGCGCT CCGAGCCGCT GGTGGTGCTG CAGGTCGACC TTTTCAATGC ACGCGGCGAG
ATGCCGCGCA CGCTGTCGGG CGTGATGGAG CGGCAGAAGG ACATCACCTA TTCGAGCCGC
ACCCGCATGA ACACCGATGC GCTGGCCGCC AACCTGAACC TGCAGCAGGC CATTGCCGAC
CTGATCTCCA AGCTGCCGGC GCGCCTTCGC AATGACCCTT CGGTGCTCGC GGTGCAGGCC
GAGCTCACGC ACCACCCGAT CGACATCTTC CACCTGATCT ACCGCGACAA GCCCTACGAG
GTCGAATCGA AGGACTACGA GTTCTCGCGC GCCGCCGTCG AAGAGCATTG GGAGGCCGGC
GCGCGCGACA TGCGGCGCAC GCTCGCGCAT CCCGAGACGC TGCGCAGCGA CGCCACCGTG
AACGGCGTGA CCACCTTCGA CCTCGGCGAG CCCGGCGTGG AGCGCGTCAA GCGTCCCGGG
CTGTCGCGCT GA
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| Protein sequence | MTTKTTRKPR AASQKTLNNT FEERREDMRA ARKALVLQGG GALGAYQAGV YAALSETDLQ
PHWIAGVSIG AINAALIAGN APEKRVDRLR EFWHLVSSGP AQRLPSWLGD RATQNQWSAS
MAMLVGIPGF FEPRYSPALL MGAAAPLLSY YDTAPLKATL ERLVDFDRIN ACEARFSVGA
VDVRTGNSVY FDNTRQRIGP EHIMASGALP PGFAPVCIDG DDYWDGGIVS NTPLQYVLDI
HPRSEPLVVL QVDLFNARGE MPRTLSGVME RQKDITYSSR TRMNTDALAA NLNLQQAIAD
LISKLPARLR NDPSVLAVQA ELTHHPIDIF HLIYRDKPYE VESKDYEFSR AAVEEHWEAG
ARDMRRTLAH PETLRSDATV NGVTTFDLGE PGVERVKRPG LSR
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