Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_2215 |
Symbol | |
ID | 7969929 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 2361660 |
End bp | 2362250 |
Gene Length | 591 bp |
Protein Length | 196 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644792803 |
Product | Chromate transporter |
Protein accession | YP_002944116 |
Protein GI | 239815206 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2059] Chromate transport protein ChrA |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.735807 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCATCCGT CTCCTTCAGG CGCGGCGGCG CCGTCCGCCC ATCCGCAACC GAAGTCGCCA CGCGACCTTT TTGTTTCATT CACCTGGCTT GCGCTGCAGG GCTTCGGTGG CGTGCTGGCC ATCGTCCAGC GCGAGATGGT GGAGAAGAAG CGCTGGCTCA CGCCCGAGCA GTTCCTGGAA GACTGGGCCG TGGCCCAGGT AATGCCGGGG CCGAACGTGA TCAACCTCGC ACTGATGATC GGCGACCGCT ACTTCGGCCT GCGCGGCGCC ATTGCCGCGG TGGCCGGCAT GCTCGCGATA CCGCTCGTGG TCATCCTCGT GCTGGCCGTG CTCTATGCCC ACTACGCCGC CAACCCGCAG GTGGCCGCCG CGCTGCGCGG CATGGGCGCG GTGTCGGGCG GGCTGATCGC CGCCACCGGC ATCAAGCTGA TTCCGCAGCT GCGCAAGCAC CCGCTGGGCT TTGCCACCTG CCTGGCCTTC GTCGCGCTGG TGTTCGGCGC GATTGCGCTG TTCAAGATGC CGCTCGGCTG GGTGCTGCTG GCCGTGGGCG GCGTAGCCTG TGCGTGGACC TGGCGCAGGA TCGCCGCATG A
|
Protein sequence | MHPSPSGAAA PSAHPQPKSP RDLFVSFTWL ALQGFGGVLA IVQREMVEKK RWLTPEQFLE DWAVAQVMPG PNVINLALMI GDRYFGLRGA IAAVAGMLAI PLVVILVLAV LYAHYAANPQ VAAALRGMGA VSGGLIAATG IKLIPQLRKH PLGFATCLAF VALVFGAIAL FKMPLGWVLL AVGGVACAWT WRRIAA
|
| |