Gene Vapar_2212 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_2212 
Symbol 
ID7969926 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp2359569 
End bp2360045 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content69% 
IMG OID644792800 
Producthypothetical protein 
Protein accessionYP_002944113 
Protein GI239815203 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.894625 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGGCT TCGACGCCAT CGCCACGCCC CTGCTCGAGC ACTTCGCCGA CCTGCGCGTC 
GAAGTGGGCG TGCCGCAGGT GCTGGGCAGC AGCGCGCGCG GCCTGCGCCG CGTGGTGCCG
ATCACGGGCG GGGAAGCATC GGGCCACGGC TGGCGCGCCC GGGTGCTGCC GGGCGGCAGC
GACTTTCAAT TGATCGTGAG CGACACGCTC TCCGAACTGG ACGCGCGCTA CGGGCTGGAA
ACCGATGCGG GCGACCTGGT CTACGTACAG AACCACGCCA TTCGCGCGGC CGCGCCAGAG
GTCATGGCCA TGCTGCTGCG CGGCGAGCCG GTCGATCCGG CGCAGGTCTA CTTCCGCTGC
AGCCCGCGCT TCGAGACGGC CTCTGCTTCA CTGAAATGGA TCAACGAGCG CATGTTCGTC
GGGGCGGGCC TCAGGCACCC GGCCGAAGTC GTGATGCGCT TCTTCGCACT CATGTAG
 
Protein sequence
MSGFDAIATP LLEHFADLRV EVGVPQVLGS SARGLRRVVP ITGGEASGHG WRARVLPGGS 
DFQLIVSDTL SELDARYGLE TDAGDLVYVQ NHAIRAAAPE VMAMLLRGEP VDPAQVYFRC
SPRFETASAS LKWINERMFV GAGLRHPAEV VMRFFALM