Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_2211 |
Symbol | |
ID | 7969925 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 2359037 |
End bp | 2359558 |
Gene Length | 522 bp |
Protein Length | 173 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644792799 |
Product | GCN5-related N-acetyltransferase |
Protein accession | YP_002944112 |
Protein GI | 239815202 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1247] Sortase and related acyltransferases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.949814 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCCTGG TCCCCTGCAC CGAGGAAGCC CACGCGGGCG CCATCCTTGC CATCCTCAAC GAGGCCATTG CCAATTCGAC GGCGCTGTAC GACTACAAGC CGCGCACGCC CGAGAGCATG GTGGCGTGGT TCGCCACCAA GCGCGCCAAC GGCTTTCCCG TGATCGGCGC GGAAGACGAG AGCGGCAAGC TGCTGGGTTT TGCGAGCTAC GGCACGTTCC GCGCCTTTCC GGCCTACAAG TACACGGTGG AGCACTCGGT GTATGTCGAG GCGGGCCACC GCGGCGCGGG CCTCGGCCGC AGGCTCACGG AGGCGATCAT TGCCGAGGCC GTGGCGCACG ACGTGCACGT CATGGTCGGC GCCATCGATG CCGCCAACGC CGGCAGCATC GGGCTGCACG AGCGCCTGGG ATTCGAGCAT GCCGGCACCG TGCGTCAGGC CGGATTCAAG TTCGGCCGCT GGCTCGACGT GGCCTTCTAC CAGCGCATTC TTTCCACGCC GCTGAATCCG GTCGACGGCT AG
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Protein sequence | MRLVPCTEEA HAGAILAILN EAIANSTALY DYKPRTPESM VAWFATKRAN GFPVIGAEDE SGKLLGFASY GTFRAFPAYK YTVEHSVYVE AGHRGAGLGR RLTEAIIAEA VAHDVHVMVG AIDAANAGSI GLHERLGFEH AGTVRQAGFK FGRWLDVAFY QRILSTPLNP VDG
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