Gene Vapar_2211 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_2211 
Symbol 
ID7969925 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp2359037 
End bp2359558 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content67% 
IMG OID644792799 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_002944112 
Protein GI239815202 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1247] Sortase and related acyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.949814 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCCTGG TCCCCTGCAC CGAGGAAGCC CACGCGGGCG CCATCCTTGC CATCCTCAAC 
GAGGCCATTG CCAATTCGAC GGCGCTGTAC GACTACAAGC CGCGCACGCC CGAGAGCATG
GTGGCGTGGT TCGCCACCAA GCGCGCCAAC GGCTTTCCCG TGATCGGCGC GGAAGACGAG
AGCGGCAAGC TGCTGGGTTT TGCGAGCTAC GGCACGTTCC GCGCCTTTCC GGCCTACAAG
TACACGGTGG AGCACTCGGT GTATGTCGAG GCGGGCCACC GCGGCGCGGG CCTCGGCCGC
AGGCTCACGG AGGCGATCAT TGCCGAGGCC GTGGCGCACG ACGTGCACGT CATGGTCGGC
GCCATCGATG CCGCCAACGC CGGCAGCATC GGGCTGCACG AGCGCCTGGG ATTCGAGCAT
GCCGGCACCG TGCGTCAGGC CGGATTCAAG TTCGGCCGCT GGCTCGACGT GGCCTTCTAC
CAGCGCATTC TTTCCACGCC GCTGAATCCG GTCGACGGCT AG
 
Protein sequence
MRLVPCTEEA HAGAILAILN EAIANSTALY DYKPRTPESM VAWFATKRAN GFPVIGAEDE 
SGKLLGFASY GTFRAFPAYK YTVEHSVYVE AGHRGAGLGR RLTEAIIAEA VAHDVHVMVG
AIDAANAGSI GLHERLGFEH AGTVRQAGFK FGRWLDVAFY QRILSTPLNP VDG