Gene Vapar_2210 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_2210 
Symbol 
ID7969924 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand- 
Start bp2358388 
End bp2358975 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content72% 
IMG OID644792798 
Producttranscriptional regulator, XRE family 
Protein accessionYP_002944111 
Protein GI239815201 
COG category[K] Transcription 
COG ID[COG1396] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.949814 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAAACA ATTCATCTCC GCCTGCCGAG CCCTCCGGCA TCGACTCGCT CATTGCCGCC 
CGGCTGCTCG CGCTGCGCCA GGCCAAGGCG CTGAGCCTGG CCGAGCTGGC CGAGCTTTCC 
GGCGTCAGCA AGGCCATGAT CTCGAAGGTG GAGCGCGCGG AGAGCAGCCC GACGGCCGTG 
CTGCTGGGCC GGCTGGCCGC CGGCCTGGGC GTGCCGCTCG CGCAGCTGCT GACGGAGGAG 
AAGGCTTCGC CGCGCCGGCT GCGCCCCCGG GCCGAACAGG AGGTCTGGCG CGATCCCGAG 
GCAGGCTACC TGCGGCGCCA GGTCGCCGAG CGCGGCGCGA GCGGCGGCGT GGAGATGGTC 
GAGATCGAAT TGCCGCGTTC GGCGCAGGTC GCCTATCCGC GCTGGAGCGG CAAGCCGTAC 
CGGCAATGCC TGTGGATGCT CGAAGGCGCG CTGCGGGTGG ACTACGGCGA GGAGCGCTTC 
GAACTCGCGC CCGGCGACTG CCTGGATTTC GGCGTCGACC GGCCGCTGGT CTTCAAGGCG 
CTCGGCCGCG CGGGCTGCCG CTACCTGCTG GTCGCCTCCC CGGCATAG
 
Protein sequence
MRNNSSPPAE PSGIDSLIAA RLLALRQAKA LSLAELAELS GVSKAMISKV ERAESSPTAV 
LLGRLAAGLG VPLAQLLTEE KASPRRLRPR AEQEVWRDPE AGYLRRQVAE RGASGGVEMV 
EIELPRSAQV AYPRWSGKPY RQCLWMLEGA LRVDYGEERF ELAPGDCLDF GVDRPLVFKA 
LGRAGCRYLL VASPA