Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_2206 |
Symbol | |
ID | 7969920 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 2355597 |
End bp | 2356319 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644792794 |
Product | ABC transporter related |
Protein accession | YP_002944107 |
Protein GI | 239815197 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG4181] Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCCAAC CCCCGTCTGA TGCCATTGTC GCAGTCGAGC ATGTGTTCAA GTCCGTGACC GACTCGACCG GTACGCTCGA CATTCTGCAG AACATCGATT TCACCCTGGG CGCGCGGGAG ACCGCCGCCA TCGTGGGTGC CTCGGGTTCG GGCAAGAGCA CCTTGCTGTC GATCATTGCC GGGCTCGACA CGCCCACGCG CGGCACCGTC AGGCTCGCGG GCGACGACAT CTTCGCCATC GACGAGGACG AGCGCGCCGC GCTGCGCGCC CAGCGCGTGG GCTTCGTGTT CCAGAGCTTC CAGCTGCTGG GCAACCTGAG CGCGCTCGAG AACGTGATGC TGCCGCTCGA ACTGGCCGAC CGCAAGGATG CGCGCAAGGC CGCCACCGAG ATGCTCGGGC GCGTCGGCCT CGGCCAGCGG CTCGGCCACT ATCCCAAGGT GCTCTCGGGC GGCGAGCAGC AGCGCGTGGC GCTGGCCAGG GCCTTCGTGG TGCAGCCGGC GCTGCTGCTG GCCGACGAGC CCACCGGCAG CCTCGACTTC GCGACCGGCG AGCAGGTCAT GCGGCTGATG TTCGACCTGA ACCGCGAACT CGGCACCACG CTCGTGCTGG TCACGCACGA CCGCGGCATT GCGGCCCAGT GCGAGCGCCG CATCACCATC GAGGCCGGGC GCATGGCGCT CAACGAGTCG ACGCCGGTGC TGGTGGCTTC GCTGCAGGCA TGA
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Protein sequence | MSQPPSDAIV AVEHVFKSVT DSTGTLDILQ NIDFTLGARE TAAIVGASGS GKSTLLSIIA GLDTPTRGTV RLAGDDIFAI DEDERAALRA QRVGFVFQSF QLLGNLSALE NVMLPLELAD RKDARKAATE MLGRVGLGQR LGHYPKVLSG GEQQRVALAR AFVVQPALLL ADEPTGSLDF ATGEQVMRLM FDLNRELGTT LVLVTHDRGI AAQCERRITI EAGRMALNES TPVLVASLQA
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