| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2203 |
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| Symbol | |
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| ID | 7969917 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 2353332 |
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| End bp | 2354525 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644792791 |
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| Product | cystathionine beta-lyase |
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| Protein accession | YP_002944104 |
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| Protein GI | 239815194 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases |
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| TIGRFAM ID | [TIGR01324] cystathionine beta-lyase, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAAGC CTTCCACGAC CCTGATCCAC CACCCCTACA CGCCGCCCGC CAACTTCGCC
GCGCCGCAGC CGGGCATCTA CAAGGCATCG ACCGTGTTCT TTGCCGACGT GGCCGCGATG
CGCGCGCGCG ACTGGAAGAC CAAGGCCGGC TACACCTACG GCCTGCATGG CACGCCAACC
ACCTTCACGC TCGAGGAGCG CCTGGCCACG CTCGAAGGCG GCACCGAGTG CCTGCTGGTG
CCGAGCGGCC TGGCCGCCAT TTCGCTGGTT TCCTTCGCCT TCCTGAAGAG CGGCGACGAA
GTGCTGATTC CCGACAACGC CTACGGCCCC AACAAGGCGC TGGCGACCGG CGAGCTGGCC
AACTTCGGCA TCACGCACCG CCTGTACGAC GCGATGAATC CTGCCGACCT GGCCGCCAAG
CTCTCGGACC GCACGCGGCT GGTGTGGCTC GAGGCGGCGG GCTCGGTGAC GATGGAGTTT
CCGGACCTGC CGGCGCTCGT GAAAGCCTGC CGTGCGCGCG GCGTGATGAC GGCGCTGGAC
AACACCTGGG GCGCGGGCCT CGCGTTCGCG CCCTTCGATT TCAACGGCAG CGGGCAGGGC
GTGGACATCT CGGTGCATGC GCTCACCAAA TATCCGAGCG GCGGCGGCGA CGTGCTGATG
GGCAGCGTCG TCACGCGCGA CGAGCGGCTG CACCGCGCGC TCAAGCTCAC GCACATGCGC
ACGGGCTTCG GCGTGGGCGT CGGCGACGTG GAAACGCTGC TGCGGTCGCT GCCGAGCATC
GGGCTGCGCT ATGCCGCGCA CGACCGTTCG GCGCGCGAGC TGGCGCGCTG GCTTGCCGGC
CGCGAAGAGA TCGCGCAGGT GCTCCACCCG GCACTCGAAG GATCGCCCGG CCATGCCAAC
TGGCGTGCGC TGTGCGGCGG CACGGACCTG GCAGCGGGCC TGTTCTCGGT CGTGTTCGAC
GAAAGCTTCA GCACCGAGCA GGTCGACCGC TTCTGCGACA GCCTGAACCT GTTCCGCCTC
GGCTATTCGT GGGGCGGCCC GGTGAGCCTG GTGGTGCCCT ACGACATCGG CCTGATGCGC
GATGCCAGCG TGGCGCGCTG GCCGCACAAG GGCACGCTGG TGCGCTTCTC GGTCGGGCTG
GAAGATGTGG AAGACCTGCG GGCCGACCTG CAGCAGGCGC TCGCGCGGAT GTAA
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| Protein sequence | MSKPSTTLIH HPYTPPANFA APQPGIYKAS TVFFADVAAM RARDWKTKAG YTYGLHGTPT
TFTLEERLAT LEGGTECLLV PSGLAAISLV SFAFLKSGDE VLIPDNAYGP NKALATGELA
NFGITHRLYD AMNPADLAAK LSDRTRLVWL EAAGSVTMEF PDLPALVKAC RARGVMTALD
NTWGAGLAFA PFDFNGSGQG VDISVHALTK YPSGGGDVLM GSVVTRDERL HRALKLTHMR
TGFGVGVGDV ETLLRSLPSI GLRYAAHDRS ARELARWLAG REEIAQVLHP ALEGSPGHAN
WRALCGGTDL AAGLFSVVFD ESFSTEQVDR FCDSLNLFRL GYSWGGPVSL VVPYDIGLMR
DASVARWPHK GTLVRFSVGL EDVEDLRADL QQALARM
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