| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2195 |
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| Symbol | |
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| ID | 7969909 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 2346897 |
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| End bp | 2347802 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644792783 |
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| Product | HflC protein |
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| Protein accession | YP_002944096 |
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| Protein GI | 239815186 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
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| TIGRFAM ID | [TIGR01932] HflC protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACAGAA TCGGATTCAT CGCCTCGTCG ATCCTCGTCT TGCTCGTGCT GCTGAGCTCG
ACCCTCTTCG TGGTCGACCA GCGCCAGTTC GGCGTGGTCT ATGCCCTTGG CCAGATCAAG
AGCGTCATTA CCGAGCCGGG CCTCAACTTC AAGCTGCCGC CGCCGTTCCA GAACGTGTCG
TACATCGACA AGCGGCTGCT CACGCTCTCC AGCCTCGACA CCGAGCCGAT GCTCACGGCC
GAGAAGCAGC GCGTGGTGAT CGACTGGTAC GTGCGCTGGC GCATCACCGA TCCGCAGGCC
TACATCCGCA ACGTCGGCCT CGACGAAAAC GCGGGCGCCA CGCAGCTCAA CCGCGTGGTG
CGCAACGCCT TCCAGGAAAA CATCAACAAG CGCACCGTGC GCGACCTGAT CTCGGTGCGC
CGCGAAGCGC TGATGGCCGA CGTGCAGCGC GAAGTGCTGG CCGTGGTGAA GGGGTCCAAG
CCCTGGGGCG TGGACGTGGT CGACGTGCGC ATCACGCGTG TGGACTATGT GGAAGCCATC
ACCGAATCGG TCTACCGCCG CATGGAGGCC GAGCGCAAGC GCGTGGCCAA CGAACTGCGC
TCGACCGGTA CGGCCGAAGG TGAAAAGATC CGCGCCGACG CCGACCGCCA GCGCGAAGTG
ATCGTGGCGA ACGCCTACCG CGATGCCCAG AAGATCAAGG GCGAGGGCGA CGCCCAGGCT
GCCGCTGCGT ACAGCGAGGC CTTCGGCCGC GACCCGCAGT TCGCGCAGTT CTATCGCAGC
CTCGAGGCCT ACAAGCAGAG CTTCAACAAG AAGAGCGACG TGATGGTGCT CGACCCGTCG
TCGGACTTCT TCCGCGCCAT GCAGAGCTCG GGCACGCCCG CAGGCAACGC TCCCCCACGC
CGCTGA
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| Protein sequence | MNRIGFIASS ILVLLVLLSS TLFVVDQRQF GVVYALGQIK SVITEPGLNF KLPPPFQNVS
YIDKRLLTLS SLDTEPMLTA EKQRVVIDWY VRWRITDPQA YIRNVGLDEN AGATQLNRVV
RNAFQENINK RTVRDLISVR REALMADVQR EVLAVVKGSK PWGVDVVDVR ITRVDYVEAI
TESVYRRMEA ERKRVANELR STGTAEGEKI RADADRQREV IVANAYRDAQ KIKGEGDAQA
AAAYSEAFGR DPQFAQFYRS LEAYKQSFNK KSDVMVLDPS SDFFRAMQSS GTPAGNAPPR
R
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