Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_2194 |
Symbol | |
ID | 7969908 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 2345510 |
End bp | 2346880 |
Gene Length | 1371 bp |
Protein Length | 456 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644792782 |
Product | HflK protein |
Protein accession | YP_002944095 |
Protein GI | 239815185 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
TIGRFAM ID | [TIGR01933] HflK protein |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTCAACC TGAACGATGG CCGATGGGGC CGTGGCGACG AGCCGTCGTC CAACGGCGAC CGCCCAACCG GCAACCGGCC TCCCGACGCG GACCCGCCGG GCGGCCCGAC GCCACCGCCC TCGGGCAACA ACAACGGCAA CGGCAACCGC CCCCGCGGCC AGGGCCCGAA CCAGGGCCCG CCCGACCTCG ATGAACTCTG GCGCGACCTC AACCGCAAGC TGGGCGGCTT CTTCGGCGGC AAGGGCGGCG GCAATCGCCC CACGGGCGGC GGCAATGGCG GTGGCGGCAA CGGCTATCGG CCGGACATGA AGAATGCCGG CTTCGGCCTC GGACTGGTGG CGGCGGTGGC CGTCCTCATC TGGCTCGGGA CCGGCTTCTT CATCGTGAAC GAAGGCCAGC AGGCCGTGGT GACCCAGTTC GGCCGCTACA AGTCGACGGT CAATGCCGGC TTCAACTGGC GCCTGCCGTA TCCCATCCAG CGCCACGAGG TGGTGGTGGT CACGCAGATC CGCTCGACCG ACGTGGGCCG CGACGCCATC GTGCGCTCCA CCGGCCTGCG CGAATCGGCC ATGCTGACCG AAGACGAGAA CATCGTCGAA ATCAAGTTCG CCGTGCAGTA CCGCCTGAGC AATGCGCAGG CCTGGCTCTA CGAGAGCAAG TCGCCGGCCG AAACCATCGT GCAGGTGGCC GAGAGCTCCG TGCGCGAGGT GGTCGGCAAG ATGAAGATGG ATGCCGCGCT GGCCGAGGAG CGCGACCAGA TCGCCCCGCG CGTGCGGCAA TTGATGCAAA CCATCCTCGA CCGCTACAAG ATCGGTGTCG AAGTGGTCGG CATCAACCTG CAGCAGGGAG GAGTGCGTCC CCCCGAGCAG GTGCAGGCCG CGTTCGACGA CGTGCTCAAG GCCGGCCAGG AGCGCGAGCG CACCAAGAAC GATGCGCAGG CCTATGCCAA CCAGGTCGTG CCGCTTGCCG CCGGTACGTC CTCGCGGCTC AAGGAAGAGT CCGAAGCCTA CAAGGCGCGC ATCGTCGCAC AGGCACAGGG CGATGCCGGC CGCTTCAGCG CGGTGCTGGC CGAGTACCAG AAGGCGCCGC AGGTGACGCG CGACCGCATG TACACCGACG CCATGCAGCA GATCTATGCC AGCACCACCA AGGTGCTGGT CGATACCAAG CAAGGCTCCA ACCTGCTGTA CCTGCCGCTG GACAAGCTCA TGCAGCTGAG CGGCAGCAAC CCGGCCGCAA CGCCGGTCGA TGCGGCCAGC CCCAGCGTGG CGGGTACCGC GCCCGCCCAG TCGTCGGTGA TTCCGGTGGT GCCGCCATCG AGCGAGAGCC GTGCCCGCGA TGGCCGTTCG CGTGATCGCG ACGTGCGTTG A
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Protein sequence | MFNLNDGRWG RGDEPSSNGD RPTGNRPPDA DPPGGPTPPP SGNNNGNGNR PRGQGPNQGP PDLDELWRDL NRKLGGFFGG KGGGNRPTGG GNGGGGNGYR PDMKNAGFGL GLVAAVAVLI WLGTGFFIVN EGQQAVVTQF GRYKSTVNAG FNWRLPYPIQ RHEVVVVTQI RSTDVGRDAI VRSTGLRESA MLTEDENIVE IKFAVQYRLS NAQAWLYESK SPAETIVQVA ESSVREVVGK MKMDAALAEE RDQIAPRVRQ LMQTILDRYK IGVEVVGINL QQGGVRPPEQ VQAAFDDVLK AGQERERTKN DAQAYANQVV PLAAGTSSRL KEESEAYKAR IVAQAQGDAG RFSAVLAEYQ KAPQVTRDRM YTDAMQQIYA STTKVLVDTK QGSNLLYLPL DKLMQLSGSN PAATPVDAAS PSVAGTAPAQ SSVIPVVPPS SESRARDGRS RDRDVR
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