| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2190 |
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| Symbol | |
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| ID | 7973877 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 2341269 |
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| End bp | 2342411 |
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| Gene Length | 1143 bp |
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| Protein Length | 380 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644792778 |
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| Product | outer membrane assembly lipoprotein YfgL |
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| Protein accession | YP_002944091 |
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| Protein GI | 239815181 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1520] FOG: WD40-like repeat |
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| TIGRFAM ID | [TIGR03300] outer membrane assembly lipoprotein YfgL |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATTTCA AGCGTTTCAT GCCTGAGTCG TCCGTCCTGC GTGCAGGTTC GGCCATTGTT
CTGGCCGCGA TGCTGGCTGC CTGCTCGGGC ACCAGCAAGC CCAAGCCGGC CGAACTGCCC
GCCAACCCCG CGTTGTTCGG CGTGCGCCAG GCCTGGAGCG TGCGCATCCC GGCCGTGGGC
TTCCCGCTGG CCACCGACGT CAGCGGCGAC ATCGTCACCG TGGCCGGCAG CGACGGCACC
GTGGTCGCCA TCGACGCCCG TGCCGGCCGC GAAACCTGGC GCGCGAACGC GGGCGCCAAG
CTCGCAGCCG GCGTCGGCAG CGACGGCTCG CTGGCCGCGG TGGTCACCAC CGACAACGAA
CTCGTGGCCA TCGAAGGCGG CAAGGTCCTG TGGAAGCAGC GGCTCTCGGC CCAGGCCTTC
ACCGCGCCGC TGGTGGCCGG CCGCCGCGTC TTCGTGCAGA CCGCCGACCG CAGCATCAGC
GCCTGGGACG GCCAGAGCGG CCGCCGCCTC TGGCTGCAGC AGCGCACGGC CGAAAACCTC
GTGCTCAAGA AGTCGGGCGT GCTGATCGCC GTGGGCGATA CGCTGATCTC GGGCATCGGT
GGCCGGCTGG TCGGCATCAA CCCGGCCAAC GGCACCTCGC GCTGGGAAGC GCCCATTGCG
GCGCCGCGCG GCACCAACGA CGTGGAGCGC CTGGTCGACC TGACCGGCAG CGTGAGCCGC
GTCGGCGACA CCGTGTGCGC CCGTGCCTAC TATGCCAACG TCGGCTGCGT CGACACCGCG
CGCGGCCAGC TGCTGTGGAG CAAGCCTGCC GTGGGCGCCG AGGGCGTCAG CGGCGACGAG
GGCTTCGTCT ACGGCACCGA GTCCGACGGC AGCGTCGTGG CCTGGCGCCG CGCCGACGGC
GAGCGGGCCT GGCAGTCGAC CCGGTTCAAG AACCGCATCC TGACCGGGCC GCTCGCGGTG
GGCCGTTCGC TGGTGATCGG CGAGGACAAC GGAACGCTGC ACTTCGTCTC GCGCGAAGAC
GGCGCACTGC TCAATCGCGT CACGCCCGAT GGCTCCGCCA TTGGCGTCAC GCCGGTGATG
GCCGGCAACA CGGTGGTGGT GGTGACTGCC AACGGCGGTG TGTTTGGATA TCGCCCTGAA
TAA
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| Protein sequence | MNFKRFMPES SVLRAGSAIV LAAMLAACSG TSKPKPAELP ANPALFGVRQ AWSVRIPAVG
FPLATDVSGD IVTVAGSDGT VVAIDARAGR ETWRANAGAK LAAGVGSDGS LAAVVTTDNE
LVAIEGGKVL WKQRLSAQAF TAPLVAGRRV FVQTADRSIS AWDGQSGRRL WLQQRTAENL
VLKKSGVLIA VGDTLISGIG GRLVGINPAN GTSRWEAPIA APRGTNDVER LVDLTGSVSR
VGDTVCARAY YANVGCVDTA RGQLLWSKPA VGAEGVSGDE GFVYGTESDG SVVAWRRADG
ERAWQSTRFK NRILTGPLAV GRSLVIGEDN GTLHFVSRED GALLNRVTPD GSAIGVTPVM
AGNTVVVVTA NGGVFGYRPE
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