| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2188 |
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| Symbol | hisS |
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| ID | 7973875 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 2339241 |
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| End bp | 2340563 |
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| Gene Length | 1323 bp |
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| Protein Length | 440 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644792776 |
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| Product | histidyl-tRNA synthetase |
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| Protein accession | YP_002944089 |
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| Protein GI | 239815179 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0124] Histidyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00442] histidyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.84562 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGACA AGATCAATGC CGTCAAAGGC ATGAACGACA TATTGCCGGC GAGCGTGCCG
CGCATCGACC GCCTGCCCGA TTCGGCCCTC TGGTCGTGGT TCGAGCAGAC GGTGCGCGGC
CTCCTCGCCC GCTACGGCTA CCAGTACATG CTGACGCCGG TGGTCGAACC CACGGCGCTG
TTCGTGCGCG GACTGGGCGA GGTGACCGAT ATCGTCGAGA AGGAGATGTA CTCCTTCACC
GATGCGATGA ACGGCGACAA GCTCACGCTT CGCCCCGAGG CCACCGCCGG CATCGTGCGC
GCCATGGTCG AGCACAACGC GCTCTACAAC GGCCCGCTGC GCCTGTGGAC GATGGGGCCG
ATGTTCCGCC ACGAGCGCCC CCAGAAGGGC CGCTACCGCC AGTTCCACCA GCTCGACGTC
GAGGCGCTGG GCTTTCCCGG CCCGGACGTG GACGCCGAGC TGATCCTCAT GGTGCGGGCC
CTCTGGCGCG AGCTCGGGCT GGCCGAAGGC GAGCACGTGC GCCTGGAGAT CAACAGCCTG
GGCCAGCCGG CCGAGCGCCA GGCGCACCGC GAGGCGCTGA TCCGCCATTT CGAGGCGCAT
GCCGGCGTGC TCGATGCCGA TGCACAGCGG CGCCTGCACA GCAATCCGTT GCGCATCCTC
GACACCAAGA ATCCCGCCAT GCAGGCCGTG GTGGAGGCCG CGCCCCAACT GATGGACTTC
CTCGGCGAGG AGTCGCGCGC GCACTTCGAT GCGGTGCGCG CCGTGCTCGA CGCCGCAGGG
CTGGCCTACC GCGTCAACCC GCGCCTGGTG CGCGGGATGG ACTATTACAA CCTGACCGTC
TTCGAATGGG TCACCGACCA GCTCGGTTCG CAGGGCACCG TCTGCGGAGG AGGGCGCTAT
GACGGCCTCA TCGGCCAGAT GGGCGGCAAG CCTGCGCCGG CCGTCGGCTT CGGCCTGGGC
ATCGAGCGGC TGCTGCTGCT GATCCAGGAA CTCCGCCTGC CGGTCCCCGC CGCCGCGCCC
GCGGCCTACG CCATCGTGCC CTCGGCCGCC GCGCTGCCGC AGGTCATGGC CGTGCTCGAG
CAGCTGCGCG CCGCCGGCGT GAGCGTGCTG CAGCATGCGG GCGGCGGCAG CATGAAGGCG
CAGTTCAAGA AAGCCGACGC GAGCGGAGCG CGCTATGCGC TGGTCTTTGG CGAAGACGAA
CTGTCGCGCG GCGAAGTCAC GGTCAAATCG CTGCGCGAGG GCGGTGGCGA ACAGGTGGCA
CGGCCTCTCG CCGAGGTGGC CACCTGGGCG GCCACCCTAC AATCCCCGGC TCCCAACATC
TGA
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| Protein sequence | MADKINAVKG MNDILPASVP RIDRLPDSAL WSWFEQTVRG LLARYGYQYM LTPVVEPTAL
FVRGLGEVTD IVEKEMYSFT DAMNGDKLTL RPEATAGIVR AMVEHNALYN GPLRLWTMGP
MFRHERPQKG RYRQFHQLDV EALGFPGPDV DAELILMVRA LWRELGLAEG EHVRLEINSL
GQPAERQAHR EALIRHFEAH AGVLDADAQR RLHSNPLRIL DTKNPAMQAV VEAAPQLMDF
LGEESRAHFD AVRAVLDAAG LAYRVNPRLV RGMDYYNLTV FEWVTDQLGS QGTVCGGGRY
DGLIGQMGGK PAPAVGFGLG IERLLLLIQE LRLPVPAAAP AAYAIVPSAA ALPQVMAVLE
QLRAAGVSVL QHAGGGSMKA QFKKADASGA RYALVFGEDE LSRGEVTVKS LREGGGEQVA
RPLAEVATWA ATLQSPAPNI
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