| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2173 |
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| Symbol | |
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| ID | 7973860 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 2323328 |
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| End bp | 2324758 |
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| Gene Length | 1431 bp |
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| Protein Length | 476 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644792761 |
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| Product | dihydrolipoamide dehydrogenase |
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| Protein accession | YP_002944074 |
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| Protein GI | 239815164 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
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| TIGRFAM ID | [TIGR01350] dihydrolipoamide dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.305369 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCAACA AACAATTCGA CGTCATCGTC ATCGGCGGCG GCCCCGGCGG CTACATCGCC
GCGATCCGCG CGGCGCAGCT GGGCTTCAAC GTGGCCTGCA TCGACGAGTG GAAGAACGGC
AAGGGCGGCC CCGCACCGGG CGGCACCTGC ACCAACGTCG GCTGCATTCC ATCGAAGGCG
CTGCTGCAAT CGTCGGAGCA CTTCGACCAG GCCGGCCACC ACTTTGCCGA CCACGGCATC
AAGGTCGAAG GCCTGGGGCT GGACCTCGAC AAGATGCTGG CCCGCAAGGA CCAGGTCGTG
AAGCAGAACA ACGACGGCAT CCTGTATCTG TTCAAGAAGA ACAAGATCAC CTTCTTCCAT
GGCCGCGGCT CGTTCGTGAA GGCGGGCGAA GCCGGCTACG AGATCAAGGT GGCGGGCGCT
GCCGAAGAGT CGATCGAGGG CAAGCACATC ATCGTGGCCA CGGGCTCCAA CGCCCGCGCG
CTTCCGGGCG CGCCGTTCGA CGAGGAGAAC ATCCTCTCGA ACGACGGCGC GCTGCGCATC
GGCGCGGTGC CCAAGAAGCT GGGCCTGATC GGCTCGGGCG TCATCGGGCT TGAAATGGGT
TCTGTGTGGC GCCGCCTCGG CGCCGAAGTC ACGGTGCTCG AAGCGCTGCC GACCTTCCTC
GGCGCGGTCG ACGAGCAGAT CGCCAAGGAA GCCAAGAAGG CCTTCGACAA GCAGAAGCTC
AAGATCGAAC TCGGCGTGAA GGTCGGCGAG ATCAAGTCGT CCAAGAAGGG CGTGAGCGTG
GCCTGGACCA ACGCCAAGGG CGAAGCCCAG ACGCTGGAGG TCGACAAGCT GATCGTCTCG
ATCGGCCGCG TGCCCAACAC CATCGGCCTG AACGCCGAAG CCGTGGGCCT GAAGCTCGAC
GAGCGCGGCG CCATCGCCGT GGACGACGAC TGCAAGACCA GCCTGCCCAA CGTCTGGGCC
ATCGGCGACG TGGTGCGCGG CCCGATGCTC GCGCACAAGG CCGAGGAAGA GGGCGTTGCC
GTGGCGGAGC GCATTGCGGG CCAGCACGGC CACGTCAACT TCAACACCGT GCCGTGGGTG
ATCTACACCA ACCCCGAGAT CGCATGGGTC GGCCAGACCG AGCAGCAGCT CAAGGCCGCG
GGCCGCGCCT ACAAGGCCGG CACCTTCCCG TTCCTCGCGA ACGGCCGCGC ACGCGCGCTG
GGCGACACGA CCGGCATGGT CAAGTTCCTG GCCGACGCGG CCACGGACGA GATCCTGGGC
GTGCACATCG TGGGCCCGCA GGCCAGCGAG TTGATCTCCG AAGCCGTGGT GGCGATGGAG
TTCAAGGCCA GCGCCGAAGA CATCGCGCGC ATCTGCCATG CGCACCCGTC GCTGTCGGAA
GCCACGAAGG AAGCGGCACT TGCCGTGGAC AAGCGCACGC TGAACTTCTG A
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| Protein sequence | MANKQFDVIV IGGGPGGYIA AIRAAQLGFN VACIDEWKNG KGGPAPGGTC TNVGCIPSKA
LLQSSEHFDQ AGHHFADHGI KVEGLGLDLD KMLARKDQVV KQNNDGILYL FKKNKITFFH
GRGSFVKAGE AGYEIKVAGA AEESIEGKHI IVATGSNARA LPGAPFDEEN ILSNDGALRI
GAVPKKLGLI GSGVIGLEMG SVWRRLGAEV TVLEALPTFL GAVDEQIAKE AKKAFDKQKL
KIELGVKVGE IKSSKKGVSV AWTNAKGEAQ TLEVDKLIVS IGRVPNTIGL NAEAVGLKLD
ERGAIAVDDD CKTSLPNVWA IGDVVRGPML AHKAEEEGVA VAERIAGQHG HVNFNTVPWV
IYTNPEIAWV GQTEQQLKAA GRAYKAGTFP FLANGRARAL GDTTGMVKFL ADAATDEILG
VHIVGPQASE LISEAVVAME FKASAEDIAR ICHAHPSLSE ATKEAALAVD KRTLNF
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