| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2167 |
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| Symbol | |
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| ID | 7973854 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 2314312 |
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| End bp | 2315394 |
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| Gene Length | 1083 bp |
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| Protein Length | 360 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644792755 |
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| Product | glucose sorbosone dehydrogenase |
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| Protein accession | YP_002944068 |
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| Protein GI | 239815158 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2133] Glucose/sorbosone dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGGGCT TGGCCGTCTG GGGTGCCGCC ATGGCGCAGA TACGGCCGGA AACCATTTCG
GCCGGCCTCG AGAACCCATG GGGGGTGGCT TTTCTGCCGG GCGGCCGTTT CGTGGTCACG
GAGCGGGCCG GGCGGTTGCG GCTGATCGCT GCGGACGGCA AGATCGGCGC GCCCATCACT
GGCCTGCCCC CCATTGCGGC CGGCGGCCAG GGCGGCTTGC TCGACGTGCT GGCCGATTCG
GGCTTCGACA AGAACCGCAC ACTGTATTTC TGCTTCTCGG AACCCGCAGC CGGTGGTGGT
TCGGGCAACG GCACGGCACT GGCCAGCACG CAGCTTTCGG CCGACGGCAC GCGGCTGGAG
AACCTCAAAA TCATCTTCAG CCAGCAGCCC AAGGTGGCCA GCCGCAACCA TTTCGGCTGC
CGCATCGTCG AGGCGCGCGA CGGCACGCTG TTTCTCACGC TGGGCGAACG GTTCAGCCGC
AAGGAGGATG CGCAGAAGCT CGACAACCAC CTGGGCAAGG TGGTGCGCAT CGCCAAGGAC
GGCTCGGCGC CCAAGGACAA TCCCTTTGTC GGCCGGGCGG GTGCGCTGCC CGAGATCTGG
AGCTATGGCC ACCGCAACGG ACAGGGCGCG GTGCTCGGGC CCGATGGCCG CTTATGGATG
ACGGAGCACG GCCCGCAGGG CGGCGACGAA ATCAATATCC CGCAAGCCGG CCGCAACTAC
GGCTGGCCGG TGATCACCTA CGGCGAGAAC TATGGCGGCG GAAAGATCGG CGAGGGCATC
ACGGCGAGGG ACGGCATGGA ACAGCCGCTG CACTACTGGG TGCCGTCGAT CGCGCCCTCG
GGCATGGCTT TCCTCACCAG CGACCGCTAT GGCGCGGGCT GGAAGGGCAA CCTGTTCGTG
GGCTCGCTCA AGTTCGGCTA TCTCGACCGC ATCGAGCTGA AGGACGGCAA GGTGGTGGCC
GAGCACAAGC TGCTGGCCGA CGACCGGGCC CGCATTCGCG ATGTGAAGCA GGGGCCGGAC
GGCCTGCTCT ACGTGCTGAC CGACGAATCC GACGGCAAGC TGCTGCGCCT GCGGCCGAAC
TGA
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| Protein sequence | MAGLAVWGAA MAQIRPETIS AGLENPWGVA FLPGGRFVVT ERAGRLRLIA ADGKIGAPIT
GLPPIAAGGQ GGLLDVLADS GFDKNRTLYF CFSEPAAGGG SGNGTALAST QLSADGTRLE
NLKIIFSQQP KVASRNHFGC RIVEARDGTL FLTLGERFSR KEDAQKLDNH LGKVVRIAKD
GSAPKDNPFV GRAGALPEIW SYGHRNGQGA VLGPDGRLWM TEHGPQGGDE INIPQAGRNY
GWPVITYGEN YGGGKIGEGI TARDGMEQPL HYWVPSIAPS GMAFLTSDRY GAGWKGNLFV
GSLKFGYLDR IELKDGKVVA EHKLLADDRA RIRDVKQGPD GLLYVLTDES DGKLLRLRPN
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