Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_2159 |
Symbol | |
ID | 7973846 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 2302182 |
End bp | 2303033 |
Gene Length | 852 bp |
Protein Length | 283 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644792747 |
Product | Methylenetetrahydrofolate dehydrogenase (NADP(+)) |
Protein accession | YP_002944060 |
Protein GI | 239815150 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0190] 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.639508 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGCCC AACTGATCGA CGGCAACGCC CTCGCCAAAA CCATTCGCGC CGAGGTTGCC GGCCGCACCG CCGCACTGAA GGCCAAGGGC GTGGAGCCGG CCCTTTCCAT CATCCTCGTG GGCAGCGACC CGGCCAGCCA GGTCTACACG AAGCACAAGG TCAACGACAG CACCGAAACC GGCCTTGCGG CCACGCTCGA AACCTACCCC GCCGACATGA GCGAGGCCGC GCTGCTCGAC CGCATCCGCG CCCTCAACGA CGATCCCAAG GTGCACGGCA TCCTGGTCCA GCTGCCGCTG CCCAGGCACA TGGACAGCCA GAAGGTCATC GAGACGATCT CGCCCGCCAA GGACGTGGAC GGCTTCCACG TGGCCAGCGC CGGTGCGCTC ATGACCGGCG CGCCGGGCTT CTGGCCCTGC ACGCCCTACG GCTGCATGAA GATGCTCGAA TCCATCGGCT ACGACCTGCG CGGCAAGCAC GCGGTGGTCA TCGGCCGCAG CAACATCGTC GGCAAGCCGA TGGCCATGAT GCTGCTCGCC AGGAGCGCGA CCGTGACCAT CTGCCACAGC GCCACGCAAG ACCTGGCCGC CTTCACGCGC CAGGCCGACG TGATCGTTGC CGCGGTGGGC AAGCGCAACA TCCTGACGGC CGGCATGGTG AAGCCCGGCG CGGTCGTGAT CGACGTGGGC ATGAACCGCA AGGAAGACGG CAAGCTCGCG GGCGACGTCG ACTTCGACGG CGTCAAGGAA GTGGCCGGCT GGATCACCCC CGTGCCCGGC GGCGTCGGCC CCATGACGCG CGCCATGCTT CTGGTCAACA CCCTTGAAGC GGCCGAACGC GCCGCCAAGT GA
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Protein sequence | MTAQLIDGNA LAKTIRAEVA GRTAALKAKG VEPALSIILV GSDPASQVYT KHKVNDSTET GLAATLETYP ADMSEAALLD RIRALNDDPK VHGILVQLPL PRHMDSQKVI ETISPAKDVD GFHVASAGAL MTGAPGFWPC TPYGCMKMLE SIGYDLRGKH AVVIGRSNIV GKPMAMMLLA RSATVTICHS ATQDLAAFTR QADVIVAAVG KRNILTAGMV KPGAVVIDVG MNRKEDGKLA GDVDFDGVKE VAGWITPVPG GVGPMTRAML LVNTLEAAER AAK
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